Chaetura pelagica (chimney swift): 104397730 Help Entry 104397730         CDS       T08631                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism cpea  Chaetura pelagica (chimney swift) Pathway cpea04115   p53 signaling pathway cpea04145   Phagosome cpea04148   Efferocytosis cpea04350   TGF-beta signaling pathway cpea04510   Focal adhesion cpea04512   ECM-receptor interaction cpea04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cpea00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     104397730 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104397730 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     104397730 (THBS1)    04148 Efferocytosis     104397730 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     104397730 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     104397730 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     104397730 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cpea04131]     104397730 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cpea00536]     104397730 (THBS1) Membrane trafficking [BR:cpea04131]  Endocytosis   Phagocytosis    Opsonins     104397730 (THBS1) Glycosaminoglycan binding proteins [BR:cpea00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104397730 (THBS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS Laminin_G_3 TSP1_CCN Laminin_G_2 EGF Motif Other DBs NCBI-GeneID:  104397730 NCBI-ProteinID:  XP_010006040 LinkDB All DBs Position Unknown AA seq 1244 aa AA seqDB search MAEPELVVPATGNWSDSHCLITTVERHITRSYRSPAPAQYPTQESHISSKVPNEVPERLL PRRVSQQVPGTPVLAGSRTRMRTYRCAAAPESRSDDNSVFDLFELIGYIRKGAGRRAPGV HLVKGPESSSPAYRIEDASRIPAVPDAKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLS VEQKDGSGHVFSLVSNGKAGTLDLNLSSDGKQQLVSVEDALLATGHWKNITLFVQEDRAQ LYVGCEKMENAELDIPIQNIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGATLETI LRNKGCSSSTSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGL RSMVTTLQDRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSAT ICRKVSCPLMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSC DSLNNRCEGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGSGIITRIRLCNSPV PQLNGKPCEGEARENKSCQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQY GGKTCVGEARGTQVCNKQDCPIDGCLSNPCFAGTTCTSSPDGSWKCGACPAGYHGDGIHC EDIDECKEVPDACFVFNGVHRCENTKPGYNCLPCPPRFTGTQPFGRSVEDAMANKQVCKP RNPCTDGTHDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCV ANATYHCKKDNCPNLPNSGQEDYDKDGIGDACDSDDDDDGIPDDRDNCPFIYNPQQYDYD RDEVGDRCDNCPYNHNPDQTDTDNNGEGDACAVDIDGDGVLNEMDNCQYVYNVDQRDTDL DGVGDQCDNCPLEHNPDQEDTDSDLIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHD KDGKGDACDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDIC PENVDISETDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAV DFSGTFFINTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVV NSTTGPGEHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMY EGKKIMADSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP NT seq 3735 nt NT seq  +upstreamnt  +downstreamnt atggcagaacctgaactagttgtacctgcaactggtaactggtcggacagccactgcctg atcactacagttgagagacacataacccgcagctaccgcagcccagctccagcacagtac ccaacacaggagtctcacatttcctcaaaagtgcctaatgaggtgccagaacggctgctg cctcggcgtgtcagtcagcaggtacctggcacccctgtgctggctggctcccgtacaaga atgcgcacgtaccgctgcgcagcagctccagagtcccggagtgatgataacagtgtcttt gatctctttgaactcattggctacattcggaagggagctgggcgccgggcaccgggggtg cacctggtgaaggggccagaatcctccagccctgcttaccgcattgaagatgccagtcgc atccctgctgtccctgacgccaaattccaagacttactagatgccatccatgctgagaag ggcttcatcctcctggccactcttcggcaagccaagaagagtagaggcacactgctgtct gtggaacaaaaggatggctctggtcacgtcttcagtctagtatcaaatggcaaggcaggc accctggacctgaacctttctagtgatggcaagcagcaattagtgtcagtagaggatgcc ttgctagctacaggacactggaagaatatcaccctgtttgtgcaggaggatcgggctcag ctctatgtggggtgtgagaaaatggagaatgctgaactggacatccccatccagaacatc ttcactagggacctggccagcagtgccaggctccgcattgccaaagggggagtcaatgac aacttccagggactgctgcagaacgtgaggtttgtgtttggagcaactctggaaactatc ttgaggaacaaaggctgctcaagctccactagtgcgatcattactttggacaaccccatc aatggctccagtccagctatccgcactaattatattggccataaaaccaaggatatccaa gcagtctgtggtttttcctgtgatgaattaacaaatatgtttgtggaactccaagggctc cgatccatggtgacaacacttcaagacagagttcgcaaagtgactgaagaaaatgaactg attgccaaagtggtccagatcactcctggagtatgcattcataatggaatcttgcacaaa aataaagaagagtggactattgacagctgcactgaatgtacctgccagaactctgccacc atatgccggaaagtgtcctgtcctctcatgccatgttccaatgccactgtgcctgatggg gagtgctgcccacgatgctggcccagcgattatgcagatgatggatggtctccttggtct gaatggacttcatgttctgtgacctgtggcaatgggattcagcagagagggcgatcctgt gacagtctcaataaccgctgtgaagggtcttctgtgcagactcggacttgtcaccttcag gagtgcgacaagagatttaaacaggatggtggctggagtcactggtcgccatggtcatca tgttctgtcacttgtggcagtggcatcatcactagaattcgtctctgcaactctccagta ccacagctgaatggcaaaccttgtgagggtgaggcaagagaaaacaaatcctgccagaaa gatccttgcccaattaatggcaactggggaccatggtctccatgggatgcttgcacagtg acatgtggaggaggacttcaaaaacggagccgtctctgcaataatcctgagcctcaatat ggtgggaagacttgtgtaggtgaagctagagggactcaggtctgcaacaaacaggactgc ccaattgatgggtgtctgtccaatccctgctttgcagggactacttgtaccagctcccct gatggctcctggaagtgtggtgcctgtcctgctggctaccatggtgatggtatccactgc gaagatattgatgagtgcaaagaggttcctgatgcctgctttgtcttcaatggagtgcac aggtgtgagaatactaaacctgggtacaactgtctgccttgtccaccacgtttcaccggg acacagccatttggtcgcagtgttgaggatgccatggctaacaaacaggtctgcaagcca cgtaatccatgcacagatggaacacatgattgcaacaagaatgccaaatgcaattacctt ggccacttcagtgaccccatgtaccgctgtgaatgtaaaccaggctatgctggcaatggc ataatctgcggagaagatactgacttggatggatggccaaatgagaaccttgtttgtgtt gccaatgccacttatcactgtaaaaaagataactgcccaaatctgcccaactctggacag gaagactatgataaggatgggattggtgatgcctgtgacagtgatgatgatgatgatggt attcctgatgacagggacaactgtccattcatctacaacccacagcagtatgactatgac agggatgaggttggtgaccgctgtgataactgcccctacaatcacaaccctgatcaaaca gacactgacaacaatggagaaggagatgcatgtgcagtagatattgatggagatggggtc cttaatgaaatggacaactgccaatatgtctacaatgtagaccagagggatacagactta gatggtgttggagatcagtgtgataactgtccattggaacacaatcctgaccaggaagac actgattctgacctcataggtgatcagtgtgacaacaaccaggacattgacgaagatggc catcaaaataatcttgataactgcccctatgtgcccaatgccaatcaagctgaccatgac aaggatggaaaaggtgacgcctgtgaccatgatgatgataatgatggtatccctgatgac aaagataactgcagattggttgccaacccagatcaagctgattctgatggtgatggacgt ggagatgcttgcaaagatgactttgaccaagacagtgtgccagacatcgatgatatctgc cctgaaaatgtagatattagtgagactgatttccgaagattccagatgattcccttggat cccaaaggaacatcccagaatgatccaaactgggttgttcgtcaccagggtaaagaactg gttcagacagtaaactgtgaccctggccttgcagtcggttttgatgaattcaatgctgtg gacttcagtggcaccttcttcatcaatacagaaagggatgatgattatgctggttttgta ttcggttaccaatctagcagtcgtttctatgttgtcatgtggaagcagatcacccagtct tactgggactccacgccaaccaaagctcaaggctactcaggtctctccatcaaagttgtg aattccaccactggtccaggagaacaccttcgtaatgctctgtggcacacaggaaacact cctggccaggtgagaactttgtggcatgaccctcgtcacataggctggaaagatttcact gcatacagatggcgtcttagccacagaccaaagactggttacatcagggttgtaatgtat gaagggaagaaaatcatggcagactcgggacccatctatgataaaacgtatgctggtggt cggctaggattatttgtcttctctcaagaaatggtgttcttctcagaccttaaatatgaa tgcagagatccataa

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