Chaetura pelagica (chimney swift): 104397857 Help Entry 104397857         CDS       T08631                                  Symbol TRAF2 Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism cpea  Chaetura pelagica (chimney swift) Pathway cpea04010   MAPK signaling pathway cpea04137   Mitophagy - animal cpea04141   Protein processing in endoplasmic reticulum cpea04210   Apoptosis cpea04217   Necroptosis cpea04621   NOD-like receptor signaling pathway cpea04622   RIG-I-like receptor signaling pathway cpea04920   Adipocytokine signaling pathway cpea05132   Salmonella infection cpea05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:cpea00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     104397857 (TRAF2)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     104397857 (TRAF2)  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     104397857 (TRAF2)   09143 Cell growth and death    04210 Apoptosis     104397857 (TRAF2)    04217 Necroptosis     104397857 (TRAF2)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     104397857 (TRAF2)    04622 RIG-I-like receptor signaling pathway     104397857 (TRAF2)   09152 Endocrine system    04920 Adipocytokine signaling pathway     104397857 (TRAF2)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     104397857 (TRAF2)   09171 Infectious disease: bacterial    05132 Salmonella infection     104397857 (TRAF2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cpea03019]     104397857 (TRAF2)    04121 Ubiquitin system [BR:cpea04121]     104397857 (TRAF2) Enzymes [BR:cpea01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      104397857 (TRAF2) Messenger RNA biogenesis [BR:cpea03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      104397857 (TRAF2) Ubiquitin system [BR:cpea04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     104397857 (TRAF2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_4 zf-TRAF_2 Tropomyosin zf-RING_6 zf-C3HC4_2 DUF5918 Sina_ZnF MATH zf-C3HC4_5 zf-C3HC4_3 Motif Other DBs NCBI-GeneID:  104397857 NCBI-ProteinID:  XP_010006172 LinkDB All DBs Position Unknown AA seq 472 aa AA seqDB search MAAANSSPPSSLDLDQPGFAKEILGTKLEVKYLCSDCKNILRRPVQAQCGHRYCCYCLKK IISAGPQKCASCIQEGIYEEGISILEPNSAFPDNAARREVESLPAVCINSGCTWKGTIKE YEAHDEVCPEFPLTCEGCGKKIPREKFRDHVKSCGRSKVPCRFEVVGCAAVVENEKLPEH ESKCLAEHLYMLLSFVLSLKTGSGDLKPLPALSSSQNSSPLLAATPLCSESDLSRSLELL GRCEALERKTVTFENSLCVLNREVESVSLTAEAYSQQHRLDQEKIETLSNKVRQLERSIG LKDLAMAEMEEKIRNMEASTYDGVFIWKITEFARKRQEAITGRSPAIFSPAFYTSKYGYK MCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHIIDAFRP DVTSSSFQRPITEMNIASGCPLFCPVSVMEAKNSYVRDDAIFIKAIVDLTGL NT seq 1419 nt NT seq  +upstreamnt  +downstreamnt atggcagcagcaaactctagtccaccgagctctttggatctagaccagcctggatttgca aaggagatcctgggaactaaactggaggtcaaatatctctgctctgattgcaaaaatatc ttgagaaggccagtccaagctcagtgtggacatcgctactgttgctattgcctgaagaaa attataagtgctggacctcagaagtgtgccagctgtattcaggaaggaatatatgaagaa ggaatttctattttggaacccaactcagctttcccagacaatgctgctcgtcgggaagtg gaaagtctgcctgctgtctgcatcaacagtggctgcacgtggaagggaactattaaagaa tatgaggctcatgacgaagtctgccctgaatttccactgacttgtgagggctgtgggaag aagattccaagggagaagtttcgggaccacgtgaagtcttgtggaagatctaaagtgcct tgcagatttgaggttgttggatgtgctgcagtggtggaaaatgaaaagctaccagaacac gaaagcaagtgtttggcagagcatctctacatgctactgagctttgtgctcagcctcaag actgggtctggagacctaaagccccttcctgccctctcctcatcgcaaaacagctcccca ctactggcagcaacccctctgtgctctgagtcagacctctccaggtccctggagctcttg ggaagatgtgaagcccttgagaggaaaacagtgacctttgagaacagtctctgtgtgctc aatcgggaggtggaaagtgtgtctctgacagctgaagcctacagtcagcaacaccggctg gaccaggagaagatcgaaacactgagtaacaaggttcggcagctggaaaggagcattggg ctcaaagatctggccatggctgagatggaggaaaagatccgcaacatggaggcttccacc tacgatggtgttttcatctggaagatcacagagtttgcccggaagcgtcaggaggcgata acaggccgctctcctgccatcttctctccagctttctacacaagcaagtacggctacaag atgtgtctgcgtgtttacctgaatggtgatggcaccgggcgcgggacccacctgtccctg ttctttgtggtgatgaagggacccaacgatgctctcctgcggtggcccttcaaccagaag gtaaccctgatgcttctggatcagaacaaccgggagcacatcatcgatgccttccgaccc gacgtgacgtcgtcctccttccagcgacccatcacagaaatgaacattgccagtggctgc cccctgttctgccccgtctctgtgatggaagccaagaactcctatgtgcgtgatgacgcc atctttattaaagccatcgttgatctcacaggcctctaa

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