Chaetura pelagica (chimney swift): 104397996
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Entry
104397996 CDS
T08631
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04115
p53 signaling pathway
cpea04210
Apoptosis
cpea05164
Influenza A
cpea05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104397996 (APAF1)
04115 p53 signaling pathway
104397996 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104397996 (APAF1)
05168 Herpes simplex virus 1 infection
104397996 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
APAF1_C
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WHD_APAF1
NB-ARC
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_Aladin
CARD
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
eIF2A
Beta-prop_Vps41
CARD_2
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
WD40_like
Ge1_WD40
Beta-prop_DCAF4
Beta-prop_ACSF4
Beta-prop_Nup120_160
Beta-prop_DCAF12
Beta-prop_WDR11_2nd
AAA_16
nSTAND6
AAA_22
WHD_Dark
DUF2415
ATPase_2
LRRC37
Motif
Other DBs
NCBI-GeneID:
104397996
NCBI-ProteinID:
XP_010006340
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MDVKSRNYLLMNRQALEKDIKTSYIMDRMISDEVLTLQEEERVKQQNTREERAAMLINII
LTKDNNSYRSFYNALLHEGYRELAALLQDGIPAISSGNRKSSVDGMTSYVKMILCEGGVP
QRPVVFVTRPKLVDAIKKKLCCLGSEPAWVTVYGMAGCGKTVLTAEALRDHQLLEDYFPG
GVHWVSVGKQDKAGLLIKLQNLCSRLEHDSALSQRPPLNIEEAKDRLRLLMLRKYPRSLL
ILDDVWDSWVLKAFDNQCQVLITSRDRSVTDAVAGKKYEVHVESGLAHEKGLEILSLFVN
MKISELPEQANFLVRECKGSPLVISLIGALLRDFPNRWEYYLKQLQNKQFKRIRKSSSYD
YEALDEAMSISVEQLNDNCKDYYKDLSILPKDVRVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGNSFQYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVPSQEDC
MYWYNFLAYHMAGANMQKELHDLMFSLDWIKAKTELVGPAHLIHEYVEYSSILDQKGSTV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLHAQRETGAFYLEWINKKS
LKNLYRLVVRPHRDAVYHACFSKDRKRIASCGADKTLQVFKAESGERLLEISAHDDEIFC
CAFSADGEFVATCSADKKVKIWNSRTGQCRCVYEEHSEQVNCCQFNNRGGQYLLATCSSD
TFIKLWDLNKKYCRNTMIGHVNSVIHCRFSPNDEYVASCSTDGTVKLWEARSGNELKSIE
IKDFFKNADEQPDDVEALVKCCSWSRNGEMILVAAKNKLLLFDVKTCDLLTQVIVSHHST
IQYCDFCPGDELVAVALSHCSVELWNIKSLSKVAYCRGHMSWVHCVTFSPDGSLFLTSSD
DQTIRIWETKKVCKSSDAVLKSELDVVFHNDEVMILAIYNQKHLQLINGNTDSVVVQTAA
QESPISCCCLSGDLRFAAFGQESGTIKVLQLLDGKILNSWEAYRTSVQHCRFTSDCQTLI
SSAHDSTIQVWNWQLNECVFLRGHKEAIKDFRLLENSKLLSWSFDGTVKVWNITTGNTEK
EFACHGGAVLSCAVSPDNSTFSSTSADKTAKIWSFESSSVLHELKGHEACVRCCTFSPNN
KLLATGDDKGEIRIWDTLTGALLHFCSPVTVDEGEPAHGGWVTDLSFSPDSKMLVSSGGY
LKWWNVTTGESLQTFYTNGTNLKSIHVSPNFKVYVTVDNLGILYVLQKL
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaagagtagaaattatttacttatgaaccgccaagccttggaaaaagacatc
aagacctcttacattatggatcgaatgatttctgacgaagtgctaacattgcaggaggag
gagagagtgaaacaacagaacacccgggaggagcgagcagctatgctaataaatattatt
cttacaaaagataataattcatatagatccttttataatgcactacttcatgaagggtac
agagaacttgcagctcttcttcaggatggcatccctgccatctcctctgggaatagaaag
agttcagtggatggaatgacttcatacgttaagatgattctctgtgaaggaggtgtacca
cagagaccagttgtgtttgtcactcggccaaagctggtagatgctattaaaaagaaactg
tgctgcttgggaagtgaaccagcctgggtcacagtttatggaatggcaggttgtgggaag
actgttctaacagcagaagctctaagagatcatcagcttctggaagattactttccagga
ggagttcactgggtctcagttggaaaacaggacaaagcaggactcctaataaaactccag
aatctctgtagcagattagagcatgactctgccctttcacaaaggcctccacttaacatt
gaggaagctaaagatcgtcttcgtttgctgatgctacgaaaatatcccaggtctcttttg
atattggatgacgtttgggattcctgggtattaaaagcatttgataatcaatgtcaggtt
cttatcaccagcagggacagaagcgtaacagatgctgtggctggcaaaaaatatgaggtt
catgtggaaagtggtctagcacatgagaaagggctggagattttatccctatttgtgaat
atgaaaatatcagaactgccagaacaagctaacttccttgtgcgggaatgcaaaggttct
ccacttgtgatatccttgataggggcattattacgagacttccctaatcgttgggaatac
tatctcaagcagctgcagaataagcagtttaaaagaataagaaagtcttcttcgtatgat
tatgaagcccttgatgaagcaatgtccataagtgttgagcaactgaatgacaattgcaaa
gactactataaagacctctctatcctcccaaaagatgtcagagtacctactaaggttctc
tgtattctttgggatatggaaactgaagaagttgaagacatactacaggaatttgttaac
aaatcactgttgttctgtgatcgtaatgggaattcattccagtattatttacatgatctt
caacttgactttcttacagagaagaatcgcaaccagcttcaggagctacataaaaacata
gtaaatcagtacaagaaatattacaaacttaatacacctgttccatctcaagaggattgc
atgtactggtataactttctagcctaccacatggctggtgccaacatgcagaaggagctc
catgatcttatgttttctctagattggattaaagctaagacagaattggttgggcctgct
catctgattcatgaatatgtagaatacagttcaatcctggatcaaaagggcagcacagta
cgtgagaacttccaggaatttctgtcattaaatgggcaccttcttggacggcagccgttt
cctgacatcatacagctgggtctttgccagccagagacatcagaagtgtatcagcaagcc
aagctacatgctcaaagggaaacaggagcattttatttggaatggataaataaaaaatcc
ttgaagaacctctaccgtctggttgttcgtccacatagagatgcagtttatcatgcctgc
ttttctaaggatagaaaaagaatagcatcatgtggagctgataaaacacttcaggtgttt
aaagcagaaagtggagagagactcctggagataagtgcccatgatgatgaaatattttgt
tgcgctttctctgcagatggtgaatttgtagcgacttgttcagctgataaaaaagtgaag
atctggaattcaagaacaggccagtgtaggtgtgtatatgaagaacattcagagcaggtc
aattgctgccagttcaataacagaggtggtcagtatcttttagccacctgctcaagtgac
actttcatcaaactttgggatttgaacaagaagtattgcagaaatacgatgatagggcat
gtaaattccgtcattcactgtagattttcaccaaacgatgaatatgttgctagctgctca
acagatggaacagtaaagctttgggaagcacgctcaggaaatgaactgaaaagtattgag
ataaaagatttcttcaagaatgcagatgagcaaccagatgatgtggaagctttagtaaaa
tgttgctcttggtccagaaatggtgagatgattttggtggcagccaaaaataagcttttg
ctttttgatgttaagacatgtgatttgttaacacaagtcatcgtaagtcatcacagtaca
atccaatattgtgacttctgtcctggtgatgagttagtagcagttgctttgtctcactgt
tctgttgagttatggaatattaagtctttatcaaaagtagcatattgcaggggacatatg
agctgggttcactgtgtgacattttcaccagatggatctctatttctgacatcctctgat
gaccagacaatacgtatttgggaaacgaagaaagtgtgcaagtcttctgatgctgtgcta
aaaagtgaactagatgttgtatttcacaatgatgaagtgatgattttggcaatctacaat
cagaagcatttacaacttatcaacggaaatacagacagtgttgttgtgcagacagcagct
caagaatcccccatttcctgctgttgcttaagtggagatctcagatttgcagcctttgga
caggaaagcggaacaataaaggtattgcagttgttggatgggaaaattctgaattcctgg
gaggcctacaggacatctgtgcaacactgtcgatttacctctgattgtcagactctcatt
tcaagcgctcatgattcaactatacaggtgtggaattggcagttgaacgaatgtgtgttt
ctaagaggacacaaggaagcaatcaaggatttcaggcttctggaaaattcaaaacttctt
tcttggtcatttgatggaactgttaaggtttggaatatcactactggaaacacagaaaag
gagtttgcttgtcatggaggtgctgtactttcctgtgctgtttcacctgacaatagtaca
ttttcatctacttctgctgacaaaactgcaaagatatggagctttgaaagttcatctgtt
cttcatgagctgaaaggtcatgaagcctgtgttcggtgctgcactttctctccaaataac
aaattattagccactggagatgacaaaggagaaataaggatttgggacactttaacaggt
gcattacttcacttctgttccccagttactgtagatgaaggagaaccggcacatggtggt
tgggtaacagacctctcattttctcctgacagtaaaatgcttgtttcatctggaggctat
cttaagtggtggaatgtaactactggagaatccttacaaaccttctacacaaatgggaca
aacctcaagtcaatacatgtgtcccctaatttcaaagtgtatgtgactgttgataatctc
ggtattctttatgtattacagaagttgtga
DBGET
integrated database retrieval system
