Chaetura pelagica (chimney swift): 104398620
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Entry
104398620 CDS
T08631
Name
(RefSeq) uncharacterized protein C5orf42 homolog
KO
K22859
protein JBTS17
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpea03037
]
104398620
Cilium and associated proteins [BR:
cpea03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
104398620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Joubert
Motif
Other DBs
NCBI-GeneID:
104398620
NCBI-ProteinID:
XP_010007055
LinkDB
All DBs
Position
Unknown
AA seq
3132 aa
AA seq
DB search
MKVKLEVLISTCIKQRKPWPRISWVGQEKEAVFLLDDKDIHEINLASGKTKKKIPRLQSL
LKSVVVLTTSRNGMLKTGELFLWNKDQDCLKIVPAIEESRTVVAAAQECLMRLYLYVSGD
GRKALLATATACVFLWESTEHENTSSYKNSSFGRWAQILPEESVMLPSTEEKEVGVHAAF
IQNEILGDCCLCSFVFYSEECLVFTFLILRWHESSFKYVSSLPYQIHWVQQTCSLVNLVP
RCVSVKSRGALLCAFARDGLLLAVAVNQTDPKATQILFLNTLNFVTVSGSLKGCSSRNST
VPSKFIRSYWVGDMSWTPDSLFLACMLKRGSLILLTCMGEMLTLITSGCSVEFGPAEFIP
LHPLITYRQQHSFCQDSGQSLHSSDSESDLMRQRFSVASHSRLPYLIVSDGYMITVLRFP
KNLSPSGFVRSLLLDSTQRIENIHRNLLNSKSKGRPLFLRSLLSLKASLLKDAPDQSTIF
STIPKFLEEDTMSEKTMDLLVFESDDEKQVCNSPSSFCSRRTHSFVGKADQGHLEFASMF
DTIHANDDTEEKDSSSVELRSIRENLLAAWQIGISKTTEEKDTLLNYTVNCMIHFFNILQ
FVKSSLLNQDASLNKSVKNTHWMHCVLKCFQQCLTVLHWHSRASLTGHVAKLTLQTLKLM
LIQHQDELFSKSLLACFCLLKMVSHTLSSVCLLQYENCFASPHDNSLVELDSLTVPVFQV
LDETTTQQFSSLKSLLREPPQGVNHDAKTEKRLIVLWRLLYKKVVWYQMQLNRKVNKNAE
EESIVSLLLGHIQATLQSSGVTLEQHWKINSVSGEEKFLLGSYGESVDIWRRCLSEIKAK
GGKRTRFLQSRYYLAILFCHLYQYNLSEAQGLCDHLVGEILRRSQLSVCQMENFSGMYFQ
HELWMVTGVHTEAAMAVIRSMARFMAAYFTNQLLYIFPPHWVNILPPLHIQQDRSPRVIP
LQHSLVTRAVRDQNLSSVWTAEYALDLFFIGGLIPEAVWLTHRLGDWKLAVSIGVTYQLY
CQKSSDFSRLKNTECLLPLSLSPMQTFQEKLQFLLGQPVTSEPPGCIQYKQFTDPIEEED
ADVLYHSIQELLKAAVMADADILSETFQLLMDSAKDISRKLYGLVPDGLYLPAPPLYCPQ
PASLSEEDCNDILLKTERESRQKVSGVLQRIILLFRAACCSYPAAQWYIAQLKHTRKVMQ
KIRMKGSLPLLSPFPETLLRYSKFHTVFHASSSFGDHQFDDINCKILGWFRELCALCWMF
HVRERLSDNCRRYQTARENINNHEDLTKNEYDASTVEHCLNAVEWACRMLPFCRFMNAEE
LVQDIILSLLGELPPVKKVAEIFVKAFPNPEDIRVALRDKYHALQQRLRHSFVRDPESEE
MMSAVLDAMEKVRTSSLRRVIRNIGPIEINIWEPVEEGAADDEEQCYEGFSLGTSLSRST
LTDLGNPQVYSDADTADTLSDALFAEETRAQTPSLQRDNEHQRQEEIGNKNTTCMTKALI
WKTNHKDKVYGKGMHNQCNLPIVGAWEFERDDDEYVIFLELFLSYVLERDLIKYSDLGVP
FLTSFSELLREHELNSLFFDVHTTLKRRQAKTRSQSVFRAGSCYTVTVASSDPEAKSGYN
ENQNSLKNPTIAQTTEPSLHNIMKGLNEGLFGLKHRSIYRAQSDSQGVTVAPASQTFPIH
TFCSLQTEATCKYVYKTVDVVDTLPGEELAIELMDKLNNIAKLLEWMIRWSDQRLLCHSN
KQDSLEEIFPMIHVKTSAAAVLTSLWLLEQFYRDGTEAKSIKYKSLDNQYLKESASVSEA
ESRTEKESSTDEGSSVLVSPLPDVQSVQPSDLCEVVFGMSTKPKYYNKKEINDGSYPVPH
MTEDLNEVRPFVQEELDVTSEREFFEEPFETPKSTSSSIKIKPLDHQGGKVVSVSDIDSP
QEDQKAEKTKGEAQQNVVIKVATGTNSHSASLEQDAKVPSNREISLSDGQPSQTVESTAS
SLFSTPSICTKKQDVKEEFPAEERLNTSETVRQMLQDEMFKLVQLQQINFMSLMQIVQSS
FGNLPNVQQISQHNQSVPPEGGQPAHATEVRGSLKTQLPPQEDKGRPDLQPRNSVREESN
NGHIKNHLDVNVSLNRLESQSKATGFMPPFQDLSSSALIKPLHLLASSSDVQKTPKLIPV
EKTMKYSNGFPLLKLESGHHFKPAFLHPMQMSSLAFDRPIPRIAWSSSDSIWNRQSSDIQ
RKSKPKEDLNMLRYDPKIPRQMPKKEARWAEKVHKGPPKHLNLDQYEGQQEASPQQQSSA
NMNMDKALITQNLAGIPLLHLQLDPVPRVPPAVRQPITATLIPIKPDIKETYCRETAQHT
GISLLHANLSPKKKAPKLIPVRDLIAFERHQHRTVPSSSCGQDQPEPIQLLKTDVEPFEL
RNVDNNRKRQKRRDKQIKEEEEKKKTSVSFCSADSIISISDATTVVASGTEDQQAKSTSY
LQDAFCISVGATREAVTTSADLHYMASTGKKPAETQDASTNTHPVLKPYEDIGTSAGNEV
PELQKKESVVSVPVPESSSALEILPPDMYLNQRFPSEVTERPLSSLLLDVRDLSEHEYVS
VIDIEGSNIINNLPMIPESAEEIDTVLQNENFEIPSTSKVNHIAASVTTVIPPKMLQKRD
GHRKNISRQMQKEDKNSYSAGGEATWNIVPEGDRILPSSGLPSKVIGKEYFSTKQQDIDI
QLQTLQSRTKEEDFRNTELLVKIIEDFEVAANSSVGDHPSFSEDGRIIDDEHYLRDMIFE
DVTDVEKEALNLEYPIPGFTSLEVHSPASSASASNLASGVKSSPDFQVSRDLCDSSLEDC
LQMTGLSGVTDIISDLIRQGDISPLELGFTKTQANKISRVRGSAAGRSQKTEKERKEIQA
WMKRKRRERMREYVKKLDEQRQKEHNPFNPRKDVHCSPTSKDIKYFQKKKEEKDKALLSE
HHSVRMSQALSLMNEMLCEAVVLPASEHKPLSRTRTPQEYRKRCVASTKGGHMNSPGPVL
PERSRIAAKPSFGQKVHRFTSSPGLTQSRATEYRGSRTSQQKPLHVATAAQAEGVDQESD
RDIVSPWTVPDDIQRILEDTQDSLFQASALHPVSFSPLGVVDSDSVSESTGSILSKLDWN
AVEAMVADVEDK
NT seq
9399 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaagctagaggttcttatctctacttgtatcaagcaaagaaaaccatggcct
cgcatctcatgggttggacaggaaaaagaggctgtttttcttctagatgataaagatata
catgaaattaacctggcatcggggaagacaaagaagaaaatccctcggctgcagtcattg
ttgaaaagtgtagttgttttaacaacatcaagaaatggaatgcttaaaacaggagagctg
tttctttggaataaagatcaggactgcttgaaaattgtgccagcaatcgaagagtctagg
acagtagttgcagcagcacaagagtgtttaatgagattgtatttgtatgtatctggagat
ggcagaaaggcattgctagctactgctacagcatgtgtctttttgtgggagagcacagaa
catgaaaatacgtcctcttataaaaattcttcatttgggcgttgggcacaaattttgcct
gaagaatcagtcatgttgccttctactgaagaaaaagaagttggggtgcatgctgctttc
atacaaaatgagatactgggtgattgctgtttgtgctcttttgtgttttactctgaggag
tgtttggtgttcacatttttgattcttcgatggcatgaaagcagcttcaaatatgttagt
tctttgccataccagatacattgggtacagcagacttgttctcttgttaatttggttcct
cggtgtgtatcggtaaagtcaagaggagctttgctgtgtgcatttgcaagagatggactt
ctgcttgcagttgctgttaatcaaactgatccaaaggcaactcagattttgtttttaaat
acattgaattttgtaactgtttcgggtagccttaaaggttgtagtagcaggaatagcaca
gtcccatccaaatttatcagatcttactgggttggtgatatgagttggactcctgatagc
ctcttcttggcttgcatgttaaaacgtggatctttgattttattgacatgtatgggtgaa
atgctgaccttgattacttctggctgctctgtagaatttggaccagcagaatttattcca
cttcatccactaataacatacagacagcagcattctttttgtcaagactctggtcagtct
cttcattcttccgattctgaaagtgaccttatgagacagagattctctgttgcttcacat
tcaagactaccctacctcattgtctctgatggatacatgataacagtgcttaggtttcct
aagaacctttcaccatcaggatttgtaagatcccttttgcttgattcaacccaacgaatt
gaaaatatccatcggaatttgctgaactctaagtctaaagggaggcctctgtttttaaga
tcactgttgtctttaaaagctagtcttctaaaagatgctccagaccaaagtaccatcttt
tccaccattccgaaattcctggaagaggacacaatgagtgagaaaaccatggatttactg
gtatttgaatcagatgacgaaaagcaggtttgcaatagcccttccagcttctgtagccga
agaacccattcatttgttggtaaagcagatcaaggccacttagaatttgcatcaatgttt
gatactatccatgcaaatgacgatactgaagagaaagattcgtcatcagtggaactccgt
tccattcgggaaaacctccttgctgcatggcagatagggatttcaaaaacgacggaggag
aaggatacattgctgaattacacagtgaactgcatgatccattttttcaacattcttcag
tttgtgaaaagttctttgctaaaccaggatgcatctttaaataagtctgtgaagaatact
cactggatgcattgtgtcctaaaatgctttcaacagtgtttaactgtcttgcactggcat
tcaagagccagtctaactgggcatgtggcaaagttgacattgcaaactttaaaactgatg
cttatacagcaccaagacgaattgttctcaaaaagccttttggcatgcttctgtcttttg
aaaatggtttcccatactctaagtagcgtgtgcctactacagtacgagaattgttttgca
tcccctcatgataatagtcttgtggaacttgactctctcactgtgcctgttttccaagtt
cttgatgagactactactcagcagttcagctcactgaaatctcttcttagagagcctcct
caaggagtgaaccatgatgcaaaaacagaaaaaaggttgattgtactgtggcgattattg
tataagaaggtggtttggtatcagatgcagctgaacagaaaagtgaacaagaatgcagaa
gaagagtctattgtctcattgcttttaggtcatatacaagcgaccctccaatcctcagga
gtgacgttagaacagcattggaagattaattctgtatctggtgaggagaagttcctttta
ggctcatacggggaatctgtggacatctggagaaggtgccttagcgaaataaaggcaaaa
ggaggaaaaagaacacgttttcttcagagtagatattatcttgcaatattattttgccat
ctgtatcaatataacttgagtgaggctcagggactctgtgatcatctggtaggagagatt
ctaaggcgatcacagctctcagtgtgtcagatggaaaatttttctggtatgtattttcag
catgaactatggatggtaacaggtgttcatacagaagctgctatggctgtgattcgatcc
atggcacgattcatggcagcttacttcacaaatcagctgctttatatctttccaccacat
tgggttaacatcctacctccacttcacatccaacaagaccgatctcctcgtgttattcca
ctacaacactctttggttaccagagctgtcagggaccagaacctttcgtctgtgtggaca
gctgaatatgctcttgatttgttctttattggtggactcattccagaggctgtgtggtta
acacacagacttggggactggaaactggctgtttccattggtgtgacctaccagctgtat
tgtcagaagtctagtgacttctcaagattgaaaaacacggagtgtttactgcctctaagc
ttatcaccaatgcagacttttcaggaaaagttacaatttttgttagggcagccagttact
tctgaaccaccaggatgtattcaatacaagcagttcacagatcccattgaagaggaagat
gcagatgttctttatcattcaatacaggaactgctgaaagcagctgttatggcagatgca
gatattctgtcagagacatttcagcttttgatggattctgccaaggatattagcagaaag
ctgtatggtttagttccagatgggctttatcttccagcaccaccattgtattgtcctcag
ccagcttctctcagtgaagaagactgcaatgatattcttctaaaaactgagagagaaagt
cgtcagaaagtgtcaggagttcttcagcgaattatcttgcttttccgggctgcttgttgt
tcctaccctgcagcacagtggtatattgcacaactgaagcacacgagaaaagttatgcag
aaaattcgaatgaaaggatctcttcctttgctgagtccctttccagagactttgctccgt
tactccaagttccacaccgttttccatgcatcttcatcttttggagaccatcagtttgat
gatataaactgtaaaattttaggttggttcagagagctgtgtgcattgtgttggatgttc
cacgttcgtgaaaggttatctgacaactgtcggcggtaccaaactgcaagggaaaacatt
aacaatcatgaggatctgacgaagaatgagtatgatgcctccactgttgagcattgtctg
aatgcagtggagtgggcttgtcggatgcttccattctgcagattcatgaatgctgaagaa
ttagttcaagatataattttgagtttgcttggagaattgccaccagtgaaaaaggtggca
gagattttcgtaaaagcatttcctaatcctgaagatataagagttgcactaagagataaa
taccatgcacttcagcagcgactcaggcacagttttgtaagagatcctgaaagtgaagaa
atgatgtctgctgttttagacgctatggaaaaagtgagaacaagctcattaagacgtgta
ataaggaacataggccctatagaaattaatatttgggagccagtggaagaaggagctgca
gatgatgaggaacagtgttatgagggattctcattaggcactagtctaagcagaagcaca
cttactgatcttggaaatcctcaggtatatagtgatgctgacacagcagatacactttct
gatgctttgtttgctgaagaaacgagagctcaaacaccgtcactccaaagggataatgaa
catcagagacaagaagaaatagggaacaaaaataccacgtgcatgacaaaagctcttatc
tggaaaacaaaccataaagacaaagtatatggaaaaggcatgcataatcaatgtaatttg
cctatagttggtgcttgggaatttgaacgagatgatgatgaatacgttatttttttagaa
ctctttttgagttatgttcttgagagagatctgataaagtacagtgaccttggagttcca
tttcttactagcttttctgaacttcttagggaacatgaattaaactctctcttttttgat
gtccatacaacactaaaacgtcgacaagccaaaactagaagccaaagtgtctttagagca
gggtcttgctatactgtaaccgtggcatcttctgatcctgaagcaaagtctggctataat
gaaaaccaaaatagtctgaaaaatccaactattgcgcagacaacagaaccctctctgcat
aacattatgaaaggacttaatgaaggattatttggtttaaagcacagatcaatttacaga
gctcagagtgacagtcaaggagtcactgttgcaccagcaagccagacctttcctatccat
actttctgtagcctgcaaactgaggcaacttgtaaatacgtttacaaaactgttgatgta
gttgatactctaccaggagaagaactagctatagaattgatggataagttgaacaatatt
gcaaaattgcttgagtggatgatcagatggtctgatcagagactgctctgtcattccaat
aaacaagattccttagaagagattttccctatgatacacgtgaagacatcagcagctgcg
gtccttacttctttgtggctattagagcagttttacagagatggaactgaagcgaagagc
ataaaatacaagagtctggataatcagtatctgaaagaatctgcgtctgtatcagaagcc
gagtctaggacagagaaagaaagtagtacagatgaaggctcttccgtactggtcagtcct
ctgcctgatgtccagagtgtacaaccctctgatctttgtgaagttgtttttggaatgtct
actaagccaaaatattataataagaaggaaattaatgatgggagttatcctgtacctcac
atgactgaagatcttaatgaagtgagaccatttgttcaggaggagttagatgtaacatca
gaaagagagttctttgaggagccatttgaaactccaaagagcaccagtagctctatcaag
atcaaacctttggaccatcaaggaggaaaggtggtttctgtttcagacatagatagtccc
caggaagatcaaaaggctgaaaaaacaaaaggagaggctcagcagaatgttgtgattaag
gttgctactggcaccaattctcactcagcctctttagaacaagatgcaaaagttcccagt
aatagagagatttctctaagtgatggtcagccttctcagactgttgagtcaacagcgtca
agtcttttctccactccgtccatttgtacaaagaagcaagatgtcaaggaagaattccct
gcagaagagagattaaacacatcagaaactgtcaggcagatgctccaagatgaaatgttc
aagttagttcagctacagcagatcaacttcatgagtttaatgcaaatagtgcagtcatcc
tttggcaacttgccaaatgtgcaacaaatttcgcaacacaatcagtctgttcccccggaa
ggaggtcagcctgcacacgctactgaagttagaggctctctgaaaacacagctgccccct
caagaagataaaggaagacctgatcttcaaccaaggaacagtgtaagagaggaaagcaac
aatggccatataaaaaatcatctggatgttaacgtttctttaaacagattagaaagccaa
agcaaagcaacaggatttatgcctccatttcaagacttatcttcttcagcacttataaaa
ccacttcatctcctagcttcttcctcagatgtccagaaaacaccaaagcttatccctgta
gaaaaaaccatgaagtattcaaatgggtttcctttgcttaagcttgaatcaggtcatcat
ttcaaaccagcatttttacatccaatgcaaatgtcatcattggcttttgatagaccaata
ccacgaattgcctggagttcatcagattccatatggaaccgtcagtcatcagatatacaa
agaaagagtaaaccaaaagaagatttgaacatgcttagatatgaccctaaaatcccaagg
caaatgcccaagaaagaggcaagatgggcagaaaaagtgcacaagggacctcccaaacac
ctgaatctagaccagtacgaaggacagcaagaagcttcacctcaacagcagtcctctgca
aatatgaatatggacaaagcactgatcactcagaatctggctggtattccactattgcac
ttgcaacttgacccagtacctagagttcctccagctgtaaggcagccaatcactgctact
ttaatacctattaaacctgatataaaggagacttactgcagagaaacagcacagcacaca
ggaatatcattacttcatgctaatttatctccaaaaaagaaggcaccaaaactcattcca
gttcgagacctcattgcatttgaacgtcaccaacatcgtactgtgcccagtagttcctgt
ggacaagaccaacctgaacctatccagttactgaaaactgatgttgagccatttgaacta
agaaatgtggacaataacagaaaaagacaaaagaggcgagataaacaaattaaagaggag
gaggaaaagaagaaaacaagtgtatccttctgttcagcagactccatcatcagtattagt
gatgccacaacagttgttgcatcagggactgaggatcaacaagcaaaatctacatcttac
cttcaagatgctttttgcatttcagtgggcgcaacaagggaagcagttactacttcagca
gatctacattacatggcttctacaggaaaaaaaccagcagaaactcaagatgcaagtact
aatactcacccagtgctcaaaccatatgaggatattggaaccagtgctggcaatgaggtt
cctgaacttcaaaaaaaagagtcagttgtgtctgttcctgtgccagaatcatctagtgcc
cttgagatacttccaccagatatgtatttaaaccaaagattcccctctgaagtgactgaa
aggcctttatcatcccttctgctggatgtgcgtgatttgagtgaacatgaatatgtcagt
gtgattgacatagaaggcagtaacatcattaacaatttgcccatgatacctgagtctgca
gaagagatagatactgtactgcaaaatgagaactttgaaattccatctacttcaaaagtt
aatcacatagcagcttctgttactactgtgattccacccaagatgcttcagaagagagat
ggtcatcgaaaaaatatatcaaggcaaatgcaaaaggaagataagaactcatattctgct
ggaggcgaggcaacttggaacatagtacctgaaggtgacagaattttgccttcttcaggg
cttccatccaaagtaattggcaaagaatacttttccacaaagcagcaggacatagatatc
cagttacagacactacagagcagaacaaaggaggaagatttcagaaacaccgaactgcta
gtgaaaataatagaagattttgaagtggctgctaattcaagtgttggtgatcatccttca
ttctctgaagatggtagaataattgacgatgaacattatttgagggacatgatttttgaa
gatgttacagatgttgaaaaggaagccttaaacttggaatatcctatacccggttttact
tcattggaagtacactctcctgcctcttcagcttctgcttctaacttggccagtggtgta
aagtcatcacctgactttcaagtaagcagagatctgtgtgatagctctttagaagattgc
ctgcaaatgaccggtctgagtggtgtaactgacatcattagtgatcttataagacaaggt
gacatctccccgttggagctgggctttacaaaaacacaagctaacaaaatctctagggtt
cgtggttctgctgctggacgttctcagaaaacagagaaggagaggaaagagatacaagca
tggatgaaaagaaaacgaagggaaagaatgagagaatatgtgaagaaactggatgaacaa
agacagaaggagcataatccattcaatccaagaaaggatgtgcattgtagtcctacttca
aaggatattaaatacttccagaagaagaaagaagaaaaagacaaagccctgttatctgaa
catcacagtgtgagaatgtcacaggcactttctttgatgaatgaaatgttatgtgaagca
gtggtgttacctgcaagtgaacataaaccattgtccaggacaagaacacctcaggagtac
agaaaaaggtgtgtggcatctactaagggagggcatatgaatagtcctggtcctgtgctg
ccagaaaggagtagaattgctgccaaacccagctttggtcaaaaagtgcaccgtttcacc
tcatctcctggtttaacacagtccagggctactgagtacagaggcagcagaacatcacaa
caaaagcctctacatgttgccactgcagctcaggcagagggtgttgatcaggagagtgat
cgagacatagtaagtccttggactgtgcctgatgatatccaaagaatacttgaagatact
caggactccttgtttcaggcctctgcacttcatccagtgagtttctctcctcttggcgtt
gttgactctgatagtgtttctgaaagcacaggaagtatcctcagcaaactggactggaat
gcagttgaggctatggtagcagatgtggaagacaagtga
DBGET
integrated database retrieval system
