Campylobacter peloridis: CPEL_0741
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Entry
CPEL_0741 CDS
T03559
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cpel
Campylobacter peloridis
Pathway
cpel03030
DNA replication
cpel03410
Base excision repair
cpel03420
Nucleotide excision repair
cpel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPEL_0741 (ligA)
03410 Base excision repair
CPEL_0741 (ligA)
03420 Nucleotide excision repair
CPEL_0741 (ligA)
03430 Mismatch repair
CPEL_0741 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpel03032
]
CPEL_0741 (ligA)
03400 DNA repair and recombination proteins [BR:
cpel03400
]
CPEL_0741 (ligA)
Enzymes [BR:
cpel01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CPEL_0741 (ligA)
DNA replication proteins [BR:
cpel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CPEL_0741 (ligA)
DNA repair and recombination proteins [BR:
cpel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CPEL_0741 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPEL_0741 (ligA)
MMR (mismatch excision repair)
DNA ligase
CPEL_0741 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CPEL_0741 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
PTCB-BRCT
HHH_2
Nlig-Ia
BRCT_2
DNA_ligase_ZBD
DUF7569
HAT1_C
Motif
Other DBs
NCBI-ProteinID:
AJC84565
LinkDB
All DBs
Position
755702..757657
Genome browser
AA seq
651 aa
AA seq
DB search
MIYQEYLEKVKLANEWMRAYYEDDEPLASDEEYDKLIRKLREFEAKYPEKIAKDSPTQNI
APTIQSEFYKITHSAKMWSMEDVFDEAELRAWAKRAKCEFDFFIEPKFDGASLNLTYENG
VLISGATRGDGEVGEDVTLNVREIANIPKTIPYKKKIEIRGEVVILKEDFEKINEKRAKE
GLSLFANPRNGASGSLRQLDTSITKERNLKFYPWGVGENSLEFSKHSEVMEFVRSLGFLK
DDFVFCVKTLDEVIKKYHELLEKRDQKPMMMDGMVVRVNDLAHCKLLGYTVKFPKFMAAF
KFPALEKTTTLLGVNLQVGRSGVITPVAVLEPVNLDGVIVKSATLHNFDEIARLGVMIGD
SVSVIRSGDVIPKITKVFTQRRDGLESEIAKPTLCPECFSELLDEGAFLKCQNLDCKARL
VNSIIYFVSKKCLNIDGLGENIVELLFKEGKITNIESIFFLKYSDFEGLEGFKEKKINNL
LNAIENAKKCSLSRFINALGIEHIGEVAAKKLAQAFGFEWFMQSYETYANLEGFGTQMAK
SLEEFAHVNANRIKHFYEILHLEDEKKELALNENISKKTFVITGTLSKSRDHFKELIESF
GAKVSSSVSKKTDFVLYGEEAGSKLQKAQSLGVKCINESEFNALLGSDDAI
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgatttatcaagagtatttagaaaaagtaaaattagcaaatgaatggatgagggcttat
tatgaagatgatgagcctttagcaagtgatgaggagtatgataaacttattagaaaatta
agagaatttgaagcaaaatatcctgaaaaaattgccaaagattctccaacacaaaatatt
gccccaactatacaaagtgagttttataaaattacacatagtgcaaaaatgtggtctatg
gaagatgtttttgatgaagctgagcttagagcttgggcaaaaagagctaaatgtgagttt
gatttttttatagagcctaaatttgatggagcaagcttaaatttaacatatgaaaatggt
gtgttaattagcggtgctacaaggggtgatggagaagtaggtgaggatgttactttaaat
gtaagagaaattgctaatatcccaaaaaccataccttataaaaaaaagatagaaattcgc
ggtgaagtagtgattttaaaagaagattttgaaaaaatcaatgaaaaaagagctaaagag
ggtttaagcttgtttgcaaacccacgcaatggagcaagtggctctttaagacagcttgat
acaagcattaccaaagaaaggaatttgaaattttatccttggggagtgggggagaattct
ttagaatttagcaaacattctgaagtgatggagtttgtaagaagtcttggttttttaaaa
gatgattttgttttttgtgtgaaaactttagatgaggttataaaaaagtatcatgagctt
ttagaaaaaagagatcaaaagcctatgatgatggatggtatggttgtaagggttaatgat
ttagctcattgtaagcttttaggctatacggtgaaatttcccaaatttatggctgctttt
aaatttccagctttagaaaaaaccaccactttacttggggttaatttgcaagtgggaaga
agtggggtgattacccctgtggcggttttggaacctgtaaatttagatggggttatagta
aaatctgctactttacataattttgatgagatagctagacttggagtaatgataggcgat
agtgtaagtgtgataagaagcggtgatgttatacctaaaatcactaaagtttttacccaa
agacgcgatggtttagaaagtgaaatcgctaagccaactctttgtcctgaatgctttagc
gaacttttagatgagggtgcttttttaaaatgccaaaatttagattgcaaagcaaggctt
gtaaattctatcatttattttgtgtctaaaaaatgcttaaatatagacggccttggagaa
aacattgtcgagcttttatttaaagaaggaaaaatcaccaatatagaaagtatatttttc
ttaaaatacagcgattttgaaggtttggaaggctttaaagagaaaaaaatcaataatctt
ttaaatgctattgaaaatgctaaaaaatgctctttatcaagatttatcaatgctttgggt
atagagcatattggcgaagtagcggctaaaaaactagctcaagcttttggttttgaatgg
tttatgcaaagctatgaaacttatgcaaatttagaaggttttggcacacaaatggctaaa
agcttagaggaatttgcccatgtaaatgcaaatcgcattaaacatttttatgaaattttg
catttagaagatgagaaaaaagagcttgctttgaatgaaaatatttctaagaaaaccttt
gttataacgggtactttaagcaaatcacgcgatcattttaaagaattaatcgaaagtttt
ggtgcaaaagtaagttcaagtgtgtctaaaaaaactgattttgtattatatggagaggaa
gcgggttcaaaattacaaaaggctcaaagtttaggggttaaatgtattaatgagagtgaa
tttaatgcccttttaggcagtgatgatgcgatttga
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