Cucurbita pepo subsp. pepo (vegetable marrow): 111776720
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Entry
111776720 CDS
T05351
Name
(RefSeq) transcription factor PCL1-like isoform X1
KO
K28173
GARP family transcription factor, LUX subfamily
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111776720
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
111776720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
111776720
NCBI-ProteinID:
XP_023511812
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All DBs
Position
LG16:6781199..6782788
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AA seq
288 aa
AA seq
DB search
MEKNRECRFGDGNGCINGDERVFQWEDGLPDTEKLTPLSQSLVSQELASAFRILMEPHRS
ISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINVDELGSDSRKLR
RIDCFKEANSAPRGESLIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIM
RLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFP
MTYAPSPMMPMMFYSMGAHGHGLSHTGMPMVNLSTVPTHSCSTKGQHD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaacagggagtgccgatttggtgatggtaatggttgtataaatggcgatgaa
agagtttttcagtgggaggacggcctccccgacacagaaaaattaacgcctctttctcaa
tcgctggtatcgcaggaactggcttcggcgttcaggattttgatggaacctcatcggagt
atatctgatgttaagtcggcgtcgaagacgacgatattgaatatttgcgacggacaatcg
gaaggatacagaggtttcgagcttaattacgatcagacgcggggggaagacgccgcgatg
attgaatcggacgaggtgataaatgtagatgagttgggatccgattcgcggaaattgagg
aggattgattgttttaaagaagcaaattctgcgcctcggggggagagcttgatcgaggat
gcggcattggctcgaaccttgaagcggccgagggttgcatggactccgcaattgcacaaa
cggttcgtggacgtggtttctcatctagggctcaaagaagcagctcccaaagccattatg
cgattgatgaatgtcgagggattgactcgcgagaacgttgccagtcatcttcagaagtat
cgactttacttgaagaggacacaaccatcctcaacgactgacgaggcgacacagaactca
catgattctgctcccagtgccgattcacaaggaaacggctattttccatctacttttccg
atgacttatgcgccatctccgatgatgcctatgatgttctatagtatgggagctcacggc
cacggtcttagtcataccggcatgccgatggttaacctgagcactgtaccgacccactcg
tgtagcacgaaagggcagcatgattga
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