Cucurbita pepo subsp. pepo (vegetable marrow): 111781406
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Entry
111781406 CDS
T05351
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B'-like
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111781406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111781406
03041 Spliceosome [BR:
cpep03041
]
111781406
03032 DNA replication proteins [BR:
cpep03032
]
111781406
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
111781406
Spliceosome [BR:
cpep03041
]
Complex A
U1 snRNP components
Sm proteins
111781406
U2 snRNP components
111781406
Complex B
U1 snRNP components
111781406
U4/U6.U5 tri-snRNP components
111781406
Complex C
U2 snRNP components
111781406
DNA replication proteins [BR:
cpep03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
111781406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
111781406
NCBI-ProteinID:
XP_023517736
LinkDB
All DBs
Position
LG19:7977447..7981904
Genome browser
AA seq
280 aa
AA seq
DB search
MSMSKSSKMLQYVNYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN
EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP
LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMSYPAAPVIRPPGQMPMFPGQ
GPPPVGRGMPPPQFSAARPGGAPPQPFPGPPQFAQRPMGPPPTGQVMRGPPPPPRPGMAP
PPPRPGMPPPPGGAVPVYGPPRPGMPPPPNPQNQHQNQQQ
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtctaagagctccaagatgctccagtacgttaattatcggatgagggtcacg
attcaagatgggcgccaattggtgggcaagttcatggccttcgatcggcatatgaacctc
gtcctcggcgactgcgaggagttccgtaagcttccgccggctaagggtaaaaagactaat
gaggaacgtgacgaacgtcgtacccttggcctcgttcttctacgcggcgaagaggtaatt
tccatgacagttgagggtccaccgcctgctgaagagtcccgtgctaaagccgtcaatgct
gctgctatggctgggcctggtattggccgtgccgctgggagaggtatcccgactgctcct
cttgttcaagctcagcctggtcttgctggaccagttcgtggagtgggcggacccgctccg
gggatgatgcagcctcaaatctctcgcccgccagtacctcagctttcggctccgccgatg
tcatatccggctgcccccgttatccgtccacctggtcagatgccgatgtttccagggcaa
ggtccacctccggttgggagaggtatgcctccacctcaattctcggcagcgagaccaggg
ggagcccctccacaaccattcccaggtcctcctcaatttgcgcagagaccaatgggacct
ccaccaacagggcaagtgatgaggggaccgccacctccacccaggcctggaatggcacct
cccccgcctcgacctgggatgcctcctccgcctggtggcgcagttcctgtttacggacca
cctcgtcctggcatgccgcctccgcccaacccacaaaatcagcaccaaaatcaacagcaa
tag
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integrated database retrieval system
