Cucurbita pepo subsp. pepo (vegetable marrow): 111789618
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Entry
111789618 CDS
T05351
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111789618
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cpep01007
]
111789618
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111789618
Enzymes [BR:
cpep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
111789618
Amino acid related enzymes [BR:
cpep01007
]
Aminoacyl-tRNA synthetase
Class I (U)
111789618
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111789618
Prokaryotic type
Other AARSs
111789618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
111789618
NCBI-ProteinID:
XP_023526017
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All DBs
Position
LG03:10012531..10029068
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AA seq
1184 aa
AA seq
DB search
MDEVCEGKDFSFPKHEEVVLEYWSDIRAFETQLERTKDLPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQVMTGHHVTRRFGWDCHGLPVENEIDQKLGIKRRDDVLKMGIDKYNEE
CRSIVTRYVGEWEKIITRTGRWIDFKNDYKTMDLKFMESVWWVFSQLFEKGLVYKGFKVM
PYSTGCKTPLSNFEAGQSYKDVPDPEIMVTFPVLGDPHNAAFVAWTTTPWTLPSNLALCV
NANFVYVKVRNKASGKVYVVAKSRLSALPVEKQKVNAPNGSTDVVNKSNPKKKGSSNSKT
ESSVEDSYEVLEEVLGASLVGKKYEPLFDYFKEFSDVAFRVVADNYVTDDSGTGIVHCAP
AFGEDDYRVCIENQVINKGENLIVAVDDDGCFTTKITQFSGRYVKDADKDIIEAVKAQGR
LVKSGSFTHSYPFCWRSDTPLIYRAVPSWFVRVEKLKEKLLENNEKTYWVPDFVKEKRFH
NWLENARDWAVSRSRFWGTPLPVWVSEDGEEILVMDSIEKLEQLSGVKVFDLHRHKIDHI
TIPSRRGPEYGVLRRVDDVFDCWFESGSMPYAYIHYPFENVELFEKNFPGHFVAEGLDQT
RGWFYTLMVLSTALFGKPAFRNLICNGLVLAEDGKKMSKRLKNYPSPMEIINDYGADALR
LYLINSPVVRAETLRFKKEGVFGVVRDVFLPWYNAYRFLVQNAKRLEIEGFAPFSPVDQA
TLQKSFNVLDQWINSATQSLVYFVRKEMDGYRLYTVVPYLLKFLDNLTNIYVRFNRKRLK
GRTGEEDCRIALSTLYHVLLTSCMVMAPFTPFFTEALYQNLRKVSDGSEESIHYCSYPQE
GGKRGERIEESVTRMMTIIDLARNIRERHNKPLKTPLREMIVVHPDKDFLDDIAGKLREY
VLEELNIRSLIPCNDTLKYASLRAEPDFSVLGKRLGKAMGVVAKEVKAMSQEDILAFEKV
GEVTIATHCLRLSDIKVVRDFNRPDGMTDKEMDAAGDGDVLVILDLRPDESLFEAGVARE
IVNRIQKLRKKAALEPTDSVEVYFRSQDEDASVAQRVLNAQELYISEAIGSPLLPAALLP
SHAVTLAEESFQNVAGISFSIILARPVPVFNSDAVTALYKGNEKFARALEVYLLSRDLSN
LKTEFSGNGKMRVDYIDGQPGVEVALGEHVFLTAGDKFLKAKSS
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggtttgcgagggtaaggacttttcgttccctaagcacgaggaggtggtgctt
gagtattggtctgatatcagggcatttgagacccagcttgagcgcacaaaggaccttcct
gagtatattttttatgatggccctccgttcgccactggtcttccacattatggtcacatc
ttggcgggaaccatcaaggacattgtcacccggtatcaggttatgaccggtcatcacgtg
actcgtcgctttggatgggactgccatggattgcctgttgagaatgagattgatcagaag
ctagggatcaagaggagagacgatgtgttgaagatggggattgacaagtacaatgaagaa
tgcagaagtatagtcacgagatatgtgggggagtgggaaaaaatcatcacgcgtactggt
cgatggattgactttaaaaatgactataagactatggacttgaaattcatggagagtgta
tggtgggttttttctcagctcttcgagaaaggtcttgtctataaaggtttcaaggtcatg
ccatatagtactggttgcaagacgccactttcaaacttcgaagctggtcaaagctataag
gatgtccctgatcctgaaataatggtaacttttccagtactcggggatcctcataatgca
gcttttgtggcttggacaacaactccatggacccttccgagtaatcttgccctttgtgtt
aatgcaaatttcgtctatgtgaaggttcgcaacaaggcatctggaaaagtttatgtggtt
gctaaatcccgattgtcagctctacctgttgagaaacaaaaagtgaatgcaccaaatggt
tctaccgatgttgttaacaagtcaaatcctaagaaaaaaggttcctcaaattcaaaaaca
gagagctcagtggaggactcatatgaggtattggaggaagtattgggagcttctcttgtg
ggtaaaaagtacgagccactgtttgattactttaaagagttctctgatgtggcatttaga
gttgttgcagataattatgtaactgatgatagtggtacgggtattgtccattgtgctcct
gcattcggtgaagacgactatcgtgtttgcattgagaaccaagtgatcaataagggtgag
aatctgattgttgcagtcgatgacgatggttgctttacaacaaagattactcaattttct
gggcgttatgtcaaggatgcagacaaggatataattgaggccgtgaaggcacaagggagg
cttgttaaatcgggaagctttacccattcttatcctttctgctggagatctgatactccc
cttatctacagggctgtcccaagctggtttgtccgagttgagaaattaaaggagaaatta
ctggaaaacaacgagaagacttactgggtgcctgattttgtgaaggagaaaaggttccat
aattggctagagaatgcgagagattgggctgtcagccgtagtagattttggggaactcct
ctccctgtctgggttagcgaggatggagaggaaatactggtcatggattcaattgagaaa
cttgaacagctttctggtgtcaaggtgtttgatctgcatcggcacaagattgatcacatt
actattccatctagaagaggtcctgaatatggtgtgcttcggagggtagatgacgtgttt
gattgctggttcgagagtgggtctatgccatacgcatatattcattatccatttgaaaac
gttgagctttttgagaaaaactttcctgggcactttgtggcagaagggcttgatcaaact
cgtggatggttctatactctcatggttctatctactgctttatttgggaagcccgcattt
cggaaccttatttgtaatggtcttgtccttgctgaggatggaaagaagatgagcaaaagg
ttgaaaaattatccttcaccaatggaaatcatcaatgattatggagctgatgctctgaga
ttatatcttataaattctccagttgtacgtgcagagactttacgcttcaagaaggagggc
gtttttggtgttgtcagggatgttttcctgccatggtataatgcctatagatttcttgtt
cagaatgctaagaggctcgaaattgagggatttgcaccattttctcccgtagatcaagct
acccttcaaaagtcgttcaatgtgcttgaccaatggataaactctgccacccagagttta
gtatattttgtcagaaaagaaatggatgggtaccgactctacacggtagttccatatctt
ctaaagtttcttgacaatcttacaaatatttatgtgaggttcaaccgcaagagactaaag
ggccgtactggggaagaagactgcaggatagcactctctactctgtaccatgtcctttta
acatcttgtatggtcatggctccatttacaccatttttcactgaagctttgtatcaaaac
ttacggaaggtttctgatgggtcagaggaaagcattcattactgttcttatcctcaggaa
ggaggaaagagaggtgaaagaattgaagaaagtgttacaaggatgatgacaattattgat
cttgctcgcaacattcgggagcgtcataacaaacctcttaaaacacctttgagagaaatg
atagtggttcatcccgacaaagattttcttgatgacatagccggaaagctaagagagtac
gttctcgaggaattaaatataagatctcttatcccatgcaatgatacgttgaagtatgca
tctcttcgtgctgagccagatttcagtgtgttgggaaagcgtcttggaaaagctatggga
gtcgtggcaaaggaagtcaaagcaatgtcacaggaagatatcttggcttttgagaaagtg
ggagaagttactattgctactcattgtttaaggttatctgacataaaggttgttcgtgat
ttcaatcgacctgatggtatgacagacaaggaaatggacgctgctggggatggtgatgta
ctagtgattttggatttacgtcccgatgaatctctatttgaggctggtgttgctcgtgag
attgttaatagaatccagaagttgagaaagaaagctgcccttgaacctaccgactccgta
gaggtgtattttcgatcacaagatgaggatgcatcagttgcgcaaagagttttaaatgca
caggaactatacataagcgaggcaatcggttcacccctgcttccggctgcgttgttgcct
tcacatgcagtcacgcttgctgaagagagtttccaaaatgtagccgggatttcattctcg
attatcttggccagaccggtacccgtattcaattcggacgctgtgactgctctatataaa
ggtaacgagaaattcgcccgagcactcgaggtctacctgctctcgagagacctctccaac
ttgaagaccgagttctctggaaatggcaagatgagggttgattacattgatggccagccg
ggtgtggaagtggcactgggagagcatgttttcttgaccgccggcgacaagtttctgaag
gccaagtcttcatga
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