Cucurbita pepo subsp. pepo (vegetable marrow): 111790611
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Entry
111790611 CDS
T05351
Name
(RefSeq) protein SIEL isoform X1
KO
K13141
integrator complex subunit 4
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111790611
Spliceosome [BR:
cpep03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
111790611
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Gene cluster
GFIT
Motif
Pfam:
HEAT
INTS4_C
Cnd1
HEAT_GCN1_C
VPS15-like_hel
HEAT_2
PDS5
HEAT_EZ
Adaptin_N
TPR_DNAAF5
INTS4_8HBD
RTP1_C1
MMS19_N
Motif
Other DBs
NCBI-GeneID:
111790611
NCBI-ProteinID:
XP_023527352
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Position
LG03:complement(169169..175079)
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AA seq
814 aa
AA seq
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MAERDSELVSAINELDDRSFLSLCFGPSVSIRIWLLINAERFQIRPSLLLTVFLGFTKDP
YPYVRKAALDGLAGLGNTVVEDGSMIECCYFRAIELLNDVEDCVRSAAVRVVITWGLMLA
AHSPERKQHFSDEIFANLCSMTRDMSMEVRFNAFVAIKRLEIVSEDLLLQSMSKRVLSIF
KGKKSLVQCYTEQLEMLALDVAGAFVHGVEDEFHQVRKSACDALFNLIILSTKFAGEALS
LLMDVLNDDSVSVRLQALETLHHMAISNCLQLQEAHMHMFLSALSDNNGHVRSALRKLLK
LAKLPDLVTFQLSFNGLVESLESYPQDESDVLSVLFHMGQNHVNMVASIITDVFEQIDPA
SEGKLGFDSVKVIAYTVLAISAPVLDTHSLRIPPRIFSYAATLLGRISHALGDIMDQSTI
FAYLLQNSKNTGLSDLGFNPEGVPCSLTPGSYVNDILAIASPKTPATIHEKQHKDDDAIE
SIKTILSKVQDIWPLIQSGFLHEVLRTLRVCKEALEVFTYQIDKYSGALAFTLQYLKIMK
LVAKVWNLMSSKHSCRIGEWESLLGKLEKGLKGLRSRFIGFSKEEERHILELMLVTCALK
LSNGEICCHLTIMRKLSMIASNIEHLLKEECIEPSTFVCEVQRSLSKLGAITPKASCYSL
DFRKLLKTFTLNHLEISEKLKHVKAELVIPDNDYEKPLYFVPGLPVGILCQIILHNVPSE
RKLWFRITMDNTTSQFIFLDFLSLGGGCDEVREFTYTVPFYRTPKASSFIARICIGLECW
FESAEVNERRGGPKRDLAYICKEKEVYLSMIHNS
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgggattcagaacttgtttctgctattaacgaactcgacgatcggtcattc
ctctcgctttgctttggtccttcagtgtccatcaggatttggcttctaataaacgccgag
aggttccaaataaggccatcgctgttacttactgttttcctagggtttacgaaggatccg
tatccatatgttagaaaagctgctctcgatggactagcaggtttggggaatactgttgtc
gaagacggcagtatgattgaatgttgctatttccgtgctattgaacttctaaacgacgtg
gaggattgtgttcggtcagctgcagtacgcgttgtcatcacttggggtctcatgcttgcg
gctcatagtccagagaggaaacaacatttttctgatgaaatattcgctaacctttgttct
atgacaagagatatgagcatggaggtcaggtttaatgcatttgttgcaataaaaaggttg
gaaattgtttccgaggatcttcttttacaaagcatgtccaagagagtcttaagtatcttc
aaggggaaaaagtctcttgttcaatgctataccgaacaattagaaatgttggcgttggat
gttgctggggcttttgtgcatggcgtagaagatgaatttcatcaggtgcggaagtctgcc
tgcgatgctttgtttaatttgatcatcctgtcaactaaatttgctggcgaggccttgagc
ttactaatggacgtcctgaatgatgattcagtttctgtccgcttgcaagctttggaaaca
ttacatcacatggcaatttccaattgtctgcaattgcaagaagcacatatgcacatgttt
ctcagtgctttaagtgacaataatggccacgtaagatctgctttaaggaaacttcttaaa
ttagcgaagctgccagatttggtgacatttcagttgtcttttaatggtcttgtcgaaagt
ttagaatcatacccgcaggatgagtctgatgtgctctccgtgctgtttcatatgggtcag
aatcatgtaaatatggttgcctccattatcacggatgtttttgaacagatagacccagcg
tctgaaggaaaacttggatttgatagcgtgaaggtgattgcatatactgttctagctatt
tcagctcccgttctggacactcattctcttaggattccacctagaatattttcttatgca
gctacattgcttggaaggatctctcatgctctgggcgatattatggatcaaagcactatt
tttgcttacttgctgcaaaacagtaaaaacactggattatctgatctggggtttaatcca
gagggagtcccatgctcacttacacctggaagttatgtcaatgatatacttgccattgcc
tcacctaagacgcctgcaacgatacatgagaagcagcacaaagatgatgatgccatagaa
tctatcaaaactatcctctcaaaggtgcaagatatttggccgctaatacaatcgggattt
ttgcatgaagttctaaggactttgagggtttgcaaggaagcattggaagtattcacgtat
caaatagacaaatacagtggggctttagcttttacactgcaatatctcaagataatgaaa
ctggttgcgaaggtatggaatttgatgtcttcaaaacatagttgtagaattggagaatgg
gaatctctattaggaaagctagaaaaggggctgaaagggttgagaagtaggttcattgga
ttctctaaagaagaagaacgacatatcttagaattgatgttggtaacttgtgcactcaag
ttgtctaatggagaaatttgctgtcatctcacaattatgagaaaattgtcgatgatagct
tccaacatagagcatctccttaaggaagaatgtattgagccatcaacttttgtatgtgaa
gttcaaagatcattgtcaaagttaggcgccattacccctaaagcttcttgctattcactt
gattttagaaaactgctgaaaactttcaccctcaaccatctagaaatttcagaaaaactt
aagcacgtcaaggcagagctagtcattccagataatgactacgaaaaacccctctatttt
gttccaggactacccgttggtattctgtgccaaattatcctacacaatgttccaagtgag
aggaagctatggtttagaatcacaatggataacacgacaagtcagtttatcttcttggat
ttcctttccttaggaggaggttgtgatgaggttagggaatttacctataccgttccattc
tacagaactccaaaagcttcttcttttatagctaggatttgtataggacttgaatgttgg
tttgagagtgctgaagttaatgaacgccgtggaggtccaaaacgtgatctagcatacatt
tgcaaagaaaaggaagtttatctttccatgatccacaatagttga
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