Cucurbita pepo subsp. pepo (vegetable marrow): 111795051
Help
Entry
111795051 CDS
T05351
Name
(RefSeq) transcription factor PIF1-like
KO
K16189
phytochrome-interacting factor
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111795051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111795051
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
111795051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Tox-SGS
DMAC1_Dmo2
Motif
Other DBs
NCBI-GeneID:
111795051
NCBI-ProteinID:
XP_023533048
LinkDB
All DBs
Position
LG05:509332..513576
Genome browser
AA seq
548 aa
AA seq
DB search
MNRWVPDFETDEDFSLHTSSVQLHSKTSSMSDGEVMELLWKNGQAVVHSQNQKSRTKSPP
STTAEQITNRDIRPLNQEEEPQLFMQEDEMISWLHYPLVDDSTLENSLCNELLYPSQPQS
IEQNAGDSSQVCTSHGMEFRPLTSMTTTISRMTARPPIPPTRRTEPETKMNSFGIFSRYT
GRLESGPSNSKSEVRESPVVGSTSGDTTWLTPEATASDLQRTAVADASSGDLACRVMSGG
GLTATSSGNNGGLMNMTGAETEPAIQRTTSFEDRKRKGKETDDSDYICHSTDVEFESTDA
KKQGRGSTSTKRYRASEVHNLSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYL
KSLQFQVQFLWRWSMGCGMVPMMSPGVQQFMPPMPMGLGMGMETSVNLPMMPDRNMLAGS
TFPSPAGAAQIGPTFTHPAFHMTHDPNTDPSRTQGTYLSEHMHSLSEMQNINHPRFSSSL
HGYQQFLGSQQMQVPAEASQQPSPQNQPAALPRSLNQHTSRGLESIDNREPANPTMDPCL
NRRKHESS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgatgggtacctgatttcgagactgacgaagatttctcgcttcatacttcttcc
gtgcaattgcactccaagacatcttccatgtcagacggcgaggttatggaactgctgtgg
aagaacggacaggcggtagtgcatagtcagaatcagaaatccaggacgaaatcacccccg
tcaacaacggccgagcaaatcacgaacagagatattcgacctttgaatcaagaggaagag
ccgcagctctttatgcaggaggacgaaatgatttcgtggcttcattatcctcttgttgat
gactctaccttggagaatagtttatgcaatgaactcctctatccttcgcaacctcagagc
attgagcaaaacgctggcgattcttcgcaagtttgtactagtcatggcatggagttccgg
ccgttgacgtcgatgacaacaacgatatcaaggatgactgctcggccgccaataccaccg
acgagaagaacagaaccggaaacgaagatgaatagcttcgggatcttctcaaggtacaca
gggaggctcgaatctggtccgtctaactcaaagagcgaggtaagggaatctccagtcgtc
ggttcgacttcgggcgacacaacgtggttgacgcccgaagcaacggcttcggatttacag
aggacggctgtagccgacgcatcaagcggtgatttagcctgcagggttatgagcggtggt
ggattaaccgcgacatccagtggcaacaatggagggctgatgaatatgacaggggctgag
acagagcccgcaattcaaaggacgacgagttttgaggatcgaaagcggaaaggaaaagaa
acggacgattccgattacatatgccatagcacggacgttgaatttgaatctactgatgca
aagaagcaaggtcgtggatcaacctctacaaaaagatatcgtgcttctgaggtccataat
ctctcagagagaagaagaagagatcggataaatgaaaagatgaaggctttgcaggagcta
atacctcggtgtaataaggcggataaagcttcaatgttggacgaggcaattgaataccta
aagtcacttcagttccaagtgcagtttctatggagatggtccatgggatgtggtatggtg
cctatgatgtctcctggtgtccaacaatttatgccaccaatgccaatgggacttggaatg
ggcatggaaacaagtgtgaaccttcccatgatgccagatcgtaatatgttagctgggtcg
acatttccgagtccagctggagctgcccaaattggaccaactttcactcatccagccttt
catatgacgcatgatcctaataccgacccatcaagaactcaaggaacatatctgtcggaa
catatgcacagcttatcagaaatgcaaaatataaaccatccaagattctcaagttcactt
catggataccagcagtttcttggctcccaacagatgcaggtgcctgcagaagcatcacaa
cagccttccccacagaatcaaccagccgccctacccagatccctcaatcaacatactagt
cggggacttgaaagcatcgacaatcgcgaaccagcgaaccccaccatggatccatgttta
aaccggaggaagcatgaaagttcttag
DBGET
integrated database retrieval system
