Cucurbita pepo subsp. pepo (vegetable marrow): 111798153
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Entry
111798153 CDS
T05351
Name
(RefSeq) NHP2-like protein 1
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03008
Ribosome biogenesis in eukaryotes
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111798153
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111798153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111798153
03009 Ribosome biogenesis [BR:
cpep03009
]
111798153
Spliceosome [BR:
cpep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111798153
Ribosome biogenesis [BR:
cpep03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
111798153
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
111798153
NCBI-ProteinID:
XP_023536915
LinkDB
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Position
LG07
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AA seq
128 aa
AA seq
DB search
MTGEAVNPKAYPLADAQLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADT
EPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTTNEGSQLKSQIQQLK
DAIEKLLI
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagaagcggtgaatcccaaagcctatcctttggctgatgcgcagcttactatt
actattcttgatcttgttcagcaagctgctaactacaagcagctaaagaagggcgcgaat
gaagctactaagacgctgaatagagggatttcggagtttgtagtgatggctgcggacact
gagccgcttgaaattcttctccatcttcccttgttggcggaagataagaatgtgccgtat
gtatttgtcccttcaaagcaagctcttggccgagcatgcggagtcacgagacctgtaata
gcgtgttctgtaacaacaaacgaaggaagccaattgaaatcccagatacagcaactgaag
gatgccattgagaagctgttgatctga
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