KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111798730
Entry
111798730         CDS       T05351                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03420  Nucleotide excision repair
cpep04120  Ubiquitin mediated proteolysis
cpep04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111798730
   04120 Ubiquitin mediated proteolysis
    111798730
  09124 Replication and repair
   03420 Nucleotide excision repair
    111798730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cpep04121]
    111798730
   03400 DNA repair and recombination proteins [BR:cpep03400]
    111798730
Enzymes [BR:cpep01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     111798730
Ubiquitin system [BR:cpep04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   111798730
  Multi subunit type E3
   SCF complex
    Ring finger protein
     111798730
   Cul2 complex
     111798730
   Cul3 complex
     111798730
   Cul4 complex
     111798730
   Cul7 complex
     111798730
   Cul8 complex
     111798730
   Cul9 complex
     111798730
DNA repair and recombination proteins [BR:cpep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      111798730
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      111798730
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 111798730
NCBI-ProteinID: XP_023537816
LinkDB
Position
LG07:9528251..9530185
AA seq 114 aa
MDSDVTMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCI
ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 345 nt   +upstreamnt  +downstreamnt
atggactccgacgtgacgatggttccggtcggcgaggcttcgagcagtgccggtccttcg
tctaccaagaagcccaagcgttttgagatcaaaaagtggaacgccgtcgctctatgggca
tgggatatcgttgtcgataactgtgcgatctgcagaaatcatatcatggatctttgcatc
gagtgccaagcaaaccaggcaagcgcaaccagcgaggaatgtactgtggcttggggggtg
tgtaatcatgcatttcatttccactgtatcagtagatggttgaagacgcgtcaagtttgc
ccattggataatagcgagtgggaatttcagaagtacggtcactag

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