KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111801494
Entry
111801494         CDS       T05351                                 
Name
(RefSeq) putative DNA glycosylase At3g47830
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    111801494
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpep03400]
    111801494
Enzymes [BR:cpep01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     111801494
DNA repair and recombination proteins [BR:cpep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     111801494
 Prokaryotic type
     111801494
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 111801494
NCBI-ProteinID: XP_023541273
LinkDB
Position
LG09:complement(9136298..9138541)
AA seq 301 aa
MKKTTCKKRRLQKPEPNGDSPANGPRAKSIRTVNGFNCSTSEPYPAYSSPTSDECLSVRD
DLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKSESVLDGLVKTVLSQNTTE
ANSEKAFASLKSAFATWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSKRRGKLC
LEYLHHLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIGWVPDEA
DRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVPENQSCPLLKYSKN
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaagaagacgacctgtaaaaagaggcgtcttcaaaaaccagagccaaatggcgattct
cccgcgaatggacctcgagcaaaatcaatcagaactgttaatggcttcaattgctcaacc
agtgagccgtatccggcttattcttcgcccacttctgacgaatgtttgtccgtacgagac
gatctgttgaatctccatggttttccccgagagtttgtgaagtatcggaaggagagagag
aggttgagcgagtgctgttccgtcgtggacggcagtggtggtgagttagcggaaaatgtg
aaatcggagagcgttctggatgggttagtgaagacagtgctatcgcaaaacactacggag
gctaattctgagaaggcttttgcttctctcaagtctgcatttgctacctgggaagatgtt
ctttcagctgaatccaaatgcatagaggatgccataagatgtggaggattagcactcaca
aaagcctcttgcattaagaacatattgagttctttgtcaaagagaagaggcaaattatgc
ctggaatacttgcaccatttgtccatcgatgaagtaaaggctgaactgtccaccttcaaa
ggaattggtcccaaaacggtagcctgtgtattgatgttcaatcttcagaaagacgacttt
ccagtagacacccatgtcttcgagattgcgaaattcatcggttgggtcccggacgaggca
gacaggaacaaaacatatcttcatctcaaccaaaggatcccaaatcatctcaaatttgat
ctcaactgtcttctttacactcatggcaagctctgttcgaaatgttcgaagagaacaggc
ggccgacagcgaaaggtacccgaaaatcagtcttgtcccttgttgaagtactccaagaac
ctttaa

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