Cucurbita pepo subsp. pepo (vegetable marrow): 111804719
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Entry
111804719 CDS
T05351
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04075
Plant hormone signal transduction
cpep04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111804719
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111804719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111804719
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
111804719
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
111804719
NCBI-ProteinID:
XP_023545249
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Position
LG11:complement(6946424..6951457)
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AA seq
689 aa
AA seq
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MPLSELCRVAREKLDSAQDRNNMVASDLSLSPENDVFELVWENGQILQQGQSSRTRKNSN
MNTSQPLCLPGHLNNAKMGKFGAIDSVVRDVIATGSSPEVELARDDDDDDNDIVPWLSYP
LDGHLQHDYSSDFLPELSGVTINDHPARHSVASSIGKANGVHQVNRDTRLNSLHGTNLED
GNISKLSTLDVSTTGPRSSTNELRSLAPQQSQTLFPHLRVRCTGSTENASGKILRDSLMG
QTLQVPLIASSSSSTARQKLDPTPSSNSPNVINFSHFLRPAALLKSNPQNHGVVGTVGSA
ATSQRDQSSCIRNESKTCCKNAIVPSIDDNKPSDAKAPEQLRAVKHPKLACLGDSANNED
RPDRCLQVGAPKVLPDSEKAVESAFAASVCSRNSVEGASDDPTLNRKRKCHETEDSEWHS
DDVEEECNDVKRVTPTRGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK
ASMLDEAIEYLKTLQLQVQVMLCFLRQKNIMSMGAGLFMPPMMSPGGMPFMNAPHMYSPM
GVGMGMGFGIGMPDVNVGSPGYPMVQVPHVQGTHFPGPSIPAQTVMHGMPGSNFQVLGLP
GQGLPIPMPRGPIAPFTGGPFMTNPGVAVAPVENFGSAAACSSKDASPKSDSPMVPNGGT
DPLTTPTPRQANEQASCANGQPCEPHHQK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcctctatctgagctttgtcgtgtggctagagagaagcttgattcagctcaagacagg
aacaacatggttgcttcagatttatctctgagtcccgagaacgacgttttcgagctggtt
tgggagaatggccaaattttgcagcaaggtcagtccagtaggaccaggaagaactcaaat
atgaacacttcacaacctctgtgtttaccaggacatttaaataatgcaaagatgggaaag
tttggggctattgattcggtagtaagagatgttatagcgacggggtcgtcgcctgaggtc
gaattggctcgtgatgatgatgatgatgataacgatatcgtgccttggctgagttatcct
cttgatggacatctgcaacacgattattcttcggatttcttacctgaattatcaggggta
accattaacgaccaccccgcacgccatagtgttgcgtcttctataggcaaagctaatggt
gttcatcaggtaaacagagatacgcgcctaaattctttgcacggtactaatcttgaagat
ggcaatatttcgaagctttctacattagatgtttcaactactggacctagaagtagcacg
aacgaattacgttcgttagcaccccagcaaagccagacattatttccacatcttagagta
agatgtacaggcagcactgaaaacgcgtcgggcaagattctccgtgattctcttatgggc
caaactcttcaggttccattgattgcaagcagttcttcaagcacagctaggcaaaagctt
gatccaactccttcaagtaattcccccaatgttataaatttctcccattttctgcgaccg
gctgctcttctcaaatccaatcctcagaaccatggtgtcgttggaactgtgggttcagca
gctactagtcaacgcgatcaatcgtcatgtataagaaatgaatcaaagacgtgctgtaaa
aatgcgatagtgccttccatagatgataacaaaccatcagatgccaaggctcctgagcaa
ttgcgggctgtcaaacatcccaagcttgcttgtttgggagattcagctaacaatgaagac
cgacccgatcgttgtcttcaagtaggtgcaccgaaagtattgccagatagcgagaaggct
gttgaatctgcatttgctgcttctgtttgttcacgcaatagcgtggaaggagcttccgat
gatccaacgcttaacaggaagagaaaatgtcacgagactgaggattctgaatggcatagt
gatgatgtagaagaagaatgcaatgatgtgaagcgagtgactcccactcgaggaactggt
tcgaaaagaagcagggcagcagaagtgcataatttatctgaaagacgacgtagagacagg
atcaatgagaagatgcgtgcactgcaagaactcataccaaattgtaataaggtcgacaaa
gcttccatgctcgatgaagccattgagtacttgaaaacgcttcaacttcaggttcaggtg
atgctctgtttcctgaggcagaaaaatattatgtctatgggagctggtttgttcatgcct
cccatgatgtcccctggaggaatgccattcatgaatgcacctcatatgtattcacccatg
ggtgtaggaatgggaatgggattcgggatcggtatgcctgacgtgaatgttggctctcct
ggttatcccatggttcaagtgccacacgtgcaaggaacgcactttcctggcccgtccatt
ccagctcaaactgtaatgcatggaatgccaggttctaactttcaggtgcttggacttcct
ggtcaaggacttcccattcccatgccacgtggaccgattgcaccatttaccggaggtcct
tttatgaccaatcccggtgtggcagtagctcctgtcgagaattttggttcagctgcagct
tgtagctcgaaagatgcgtctccgaagagtgattcacctatggtgccaaatggtggcact
gaccctttaacaactccaactcctagacaggctaatgaacaagcttcctgtgctaatggg
cagccgtgtgaaccccaccaccaaaaatga
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