KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111805613
Entry
111805613         CDS       T05351                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-3-like
  KO
K07936  GTP-binding nuclear protein Ran
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03008  Ribosome biogenesis in eukaryotes
cpep03013  Nucleocytoplasmic transport
cpep03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111805613
   03008 Ribosome biogenesis in eukaryotes
    111805613
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    111805613
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpep03019]
    111805613
   03009 Ribosome biogenesis [BR:cpep03009]
    111805613
   03016 Transfer RNA biogenesis [BR:cpep03016]
    111805613
   03036 Chromosome and associated proteins [BR:cpep03036]
    111805613
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpep04147]
    111805613
   04031 GTP-binding proteins [BR:cpep04031]
    111805613
Messenger RNA biogenesis [BR:cpep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     111805613
Ribosome biogenesis [BR:cpep03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    111805613
  Pre-60S particles
    111805613
Transfer RNA biogenesis [BR:cpep03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    111805613
Chromosome and associated proteins [BR:cpep03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     111805613
   Spindle formation proteins
    111805613
Exosome [BR:cpep04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111805613
GTP-binding proteins [BR:cpep04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    111805613
SSDB
Motif
Pfam: Ras Roc Arf RNA_helicase MMR_HSR1 GTP_EFTU Pox_A32 ATPase AAA_24 ArgoMid Septin AAA_16 AAA_7 AAA_22
Other DBs
NCBI-GeneID: 111805613
NCBI-ProteinID: XP_023546514
LinkDB
Position
LG11:complement(1857397..1861045)
AA seq 221 aa
MALPNQATVEYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV
ESPALAPPEVQIDMAVQAQHEAELAQAAAQPLPDEDDDAFE
NT seq 666 nt   +upstreamnt  +downstreamnt
atggcgctgccaaatcaggccaccgtggagtatcctagcttcaagcttgtaattgttggc
gatggtggaacagggaagacaacctttgttaaacgtcatcttactggagagttcgagaag
aaatatgaaccgacaatcggagttgaagttcatccactggacttctttacgaactatgga
aagataaggttttactgctgggataccgctggtcaggagaagtttggtggacttcgcgat
ggttactatattcatgggcagtgtgccatcatcatgtttgatgtcactgctcgtttaacg
tacaaaaatgttccaacatggcaccgtgatctttgcagggtttgtgagaacataccgatc
gtattgtgtggaaacaaggtcgatgtgaaaaatagacaggttaaagcaaagcaggtgact
ttccacaggaagaaaaatctccaatattacgaaatctctgcaaagagtaattacaacttt
gagaagccctttttgtaccttgccagaaagcttgccgggaacacggagctccagttcgtc
gaatcacctgccctggctcctcctgaagtccaaattgatatggctgtacaagcacagcac
gaagcagagttagcgcaagctgctgcacaacctcttcctgatgaagacgatgatgctttt
gagtaa

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