Cucurbita pepo subsp. pepo (vegetable marrow): 111807235
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Entry
111807235 CDS
T05351
Name
(RefSeq) transcription factor PIF1-like
KO
K16189
phytochrome-interacting factor
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111807235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111807235
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
111807235
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
111807235
NCBI-ProteinID:
XP_023548638
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Position
LG12:8842187..8846722
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AA seq
541 aa
AA seq
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MVGRLRMNHCVPDFEMADDFSLPTFSNLTRPRKSSLPDDDVVELLWQNGQVVTHSQNQRS
VRKSPPSKFDGSIPQDQAAVREIRPSAHLEEPHELFMQEDEMAAWLNYPLVEDHNFCSDL
LFPAISVPLCANPQPELRPSTTATVTLTPRPPIPPSRIPEAQTSMQFSRNKATGESEPLN
SKVMVRESTMVDSCDTPSVGPESRASEMVRRKLVEVVSCGDVRYETARGNGGIGGSSVGG
DGIGEKEMTTCEITVTSSPGDSSASAEPPCPKLAADDRKRKGRALDDTECQSDDVDYESA
DLKKQMQGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKTDKASMLDEAIE
YLKTLQLQVQMMSMGCGMMPMMFPGVQQYLPQPMGMGMGMGMGMGMGMEMGMNRPMMQFH
NLLAGSNLPMQAGAAAAAAAAHMGPRFPLPPFATSPVPDSDPSRAQATNNQLNPMANSVG
TQNATPPSVSGFPDSYQQFLSSNQMPFHMTQPLQNHQPVQPNTIRPGTSQVPENHENHQS
G
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggttggaagattgaggatgaaccattgcgttcctgattttgaaatggccgacgatttc
tctcttccgacattctctaatttaaccaggccgagaaaatcgtctctgccggatgatgac
gtggtggagctgctatggcagaacggtcaagtggtgacacatagccagaaccagaggtcg
gtccgtaaatctccgccgtccaaattcgatggttcgattccgcaagatcaggcggcggtg
agagagatccggccgtcggctcatttggaggaacctcatgaactctttatgcaagaagat
gaaatggccgcttggcttaactatcctctcgttgaggatcataatttctgctccgacctc
ctcttccctgccatctctgttcctctttgcgccaatcctcaaccggagctccgaccgtct
acaacagcgacggtcactctcacaccgcggccaccgattcctcctagccggattcctgaa
gcgcagacttctatgcagttctcgaggaacaaagcaacgggcgaatcggagccattgaat
tcgaaggtcatggtgcgggaatcgacgatggttgattcttgtgacacgccgtctgtgggg
ccggagtctagggcttcggagatggtgaggaggaagcttgtggaggtggtgagttgtggt
gatgtgcggtacgagaccgctcgcggcaacggtggaatcggaggttcgtcggtcggtggc
gatggcattggggagaaagagatgacgacttgtgaaataactgtcacttcgtctcccggc
gactctagcgccagcgccgagcccccttgtccgaaacttgctgccgatgaccggaagcga
aagggaagagctctcgatgacacggagtgccaaagcgatgatgttgactacgaatctgct
gatctgaagaagcaaatgcaggggtcgacatcgaccaagcgatctcgtgctgccgaggtt
cacaacctctcggagaggagacgtcgggatcggataaacgagaagatgaaggcgttacag
gaactcatacctcgatgcaacaagactgataaggcttcgatgttggatgaagcgattgag
tacttgaagactcttcagttgcaagtgcagatgatgtcgatgggatgcggaatgatgccg
atgatgttcccgggcgttcagcaatacttgccacagccaatggggatgggaatggggatg
gggatggggatgggaatgggaatggaaatgggcatgaatagaccaatgatgcaatttcat
aatctccttgctggttcaaacttgccaatgcaagctggagcggccgcagcagcagcagca
gctcatatgggcccgagattccctctccctccctttgcaacgtctcctgttcccgacagc
gatccatctcgagctcaagcgacgaataatcaactcaatccaatggctaactcagttgga
acacaaaatgcaaccccaccttcagtttcgggttttcccgattcatatcagcagtttctt
agctcgaaccagatgccgttccatatgacacagcctctgcagaatcatcagccagttcag
ccgaatacgatccggccaggtacgagtcaggttcctgaaaaccacgaaaatcatcaatca
ggttaa
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