Cucurbita pepo subsp. pepo (vegetable marrow): 111811933
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Entry
111811933 CDS
T05351
Name
(RefSeq) probable DNA helicase MCM9
KO
K10738
DNA helicase MCM9 [EC:
5.6.2.4
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpep03032
]
111811933
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111811933
Enzymes [BR:
cpep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111811933
DNA replication proteins [BR:
cpep03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
111811933
DNA repair and recombination proteins [BR:
cpep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111811933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
Mg_chelatase
AAA_5
AAA
Sigma54_activat
AAA_3
MCM_N
AAA_22
AAA_16
RuvB_N
bpMoxR
AAA_7
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
111811933
NCBI-ProteinID:
XP_023554772
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All DBs
Position
LG15:4833041..4865301
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AA seq
665 aa
AA seq
DB search
MDISLAAMDDSATSPVKALASFLIRRHSDQLLSIAHSPDPKLHYPLFVEFAELMDDDPPL
ARLVFSHPTEYLRIFDDAAVWAHKITLGDSKGCINGIKKDFIHVRINVAGSPLEWPETSP
SIGSIRVKHRGVLLTLKGTVIRSGAIKMYEGERWYICRKCKHKFPVYPELETRNSIQLPS
FCPSQRAKPCEGKSFECLEGSVVRHDYQEIKIQESTQVLGVGSIPRAILVILKDDLVDLV
KAGDDVIVTGVLSAKWSPDIKDVRCDLDPMLIANHVRRTNELKAEVDIPDDIIMNFRQFW
SDFKDTPLKGRNAILRGICPQVFGLFTVKLAVALTLIGGVQHVDVSGTKVRGESHLLLVG
DPGTGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGEWMLEAGALVLADGGLCC
IDEVDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTIVFGATNPKGHYDPEQPLSVN
TTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILSECQQEKGKRDNDLSSNWPLTMLRRY
LQFVKGYFRPVLTKEAEQIISSYYQLQRRSAMDNAARTTVRMLESLIRLAQAHARLMFRN
EVTRLDAITAILCIESSMTTSALVDSVGNALHSNFTENPDEEYAKQEILILEKLKSMDEF
PEIGS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggacatctccttggcggcaatggacgactctgcaaccagtcccgtcaaggccttggct
tcgtttctaattcgccgccactccgatcagcttctttccattgctcactcccctgatcct
aagctccattaccctctattcgtggaattcgcagagctgatggacgacgatccacctctt
gctcgtcttgttttctcccatccgactgagtacttgcgtatttttgacgatgcagctgtt
tgggctcataagatcactttgggtgattcgaaaggttgtataaatggaattaagaaagat
ttcatccatgttcgcattaatgtcgccggctcccctctggaatggcctgagacttctcca
agtattgggtctatcagagtgaagcatcgtggagtgcttctcacacttaaagggacggta
atcagatctggggcaattaagatgtatgagggggagaggtggtacatttgccggaaatgc
aagcacaagttcccagtatatcccgagctggaaaccagaaactcaatacagttaccatca
ttttgtccctctcagagggcaaaaccatgtgaagggaaaagttttgagtgcttggaaggt
tctgtagtacgccatgattaccaagagataaaaattcaggagagtacacaagtattgggt
gtgggatccattcctcgtgccattctagtcattctcaaggatgaccttgttgaccttgtt
aaagctggagacgatgttattgttacaggagtattgagtgcaaagtggtccccagacatc
aaagatgtacggtgtgaccttgatccaatgctaattgctaatcatgtgagaagaaccaat
gaactgaaggcagaggttgacatccctgatgacataattatgaactttaggcagttctgg
tcagatttcaaagacactcctttaaaaggtagaaatgctattctaagaggtatttgccct
caagtgtttggactttttactgtaaaacttgcagtggctttaacactcattggaggtgta
caacatgtggatgtatctggtaccaaagttcgaggagaatctcatctactgttggttggc
gatcctggtactggaaagtcacagttcctgaaatttgctgccaaactgagcaaccgggct
gttattaccactggattaggaagcactagcgctggactgactgttgctgctgtcaaggat
ggaggggaatggatgctggaagctggggcacttgtactggctgatggaggactttgttgt
atagatgaagtggacagcatgagagaacatgacagagccacgatccatgaagcaatggag
caacagactataagcgtcgcaaaggctggtcttgtaacaactctcagtactagaacgata
gtatttggcgcaacaaatcctaaaggacattatgaccctgaacaacctctctctgtcaat
acaacactctccggacccttattgagcagatttgatatcgtccttgtgcttttagatacc
aaaaatcccgaatgggatgcagttgtttcatcacatattctctccgagtgccaacaagaa
aagggaaagcgtgataatgatctttcaagtaactggcctcttactatgcttcgaagatac
ctccaatttgtaaaaggatacttcagaccggtcctgaccaaggaggctgaacaaattatt
tcaagctactatcagcttcaaagaagatcagcaatggataatgcagccaggacaacggtc
cgcatgcttgaaagtttgatacgtttagcacaagcacatgcacggctcatgtttagaaat
gaggttactcggctcgatgccattacggctattttgtgcatcgaatcatccatgacgacc
tcagctttagtggatagtgttgggaatgccttgcactccaattttaccgagaacccagat
gaggaatatgcaaagcaagaaattttgatccttgagaagctcaagtcgatggacgaattt
cctgaaattggcagctga
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