Clostridium perfringens ATCC 13124: CPF_1082
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Entry
CPF_1082 CDS
T00378
Name
(GenBank) transcriptional regulator, MarR family
KO
K18909
MarR family transcriptional regulator, repressor for mepA
Organism
cpf
Clostridium perfringens ATCC 13124
Module
cpf_M00705
Multidrug resistance, efflux pump MepA
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpf03000
]
CPF_1082
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
cpf01504
]
CPF_1082
Transcription factors [BR:
cpf03000
]
Prokaryotic type
Helix-turn-helix
MarR family
CPF_1082
Antimicrobial resistance genes [BR:
cpf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MepA [MD:
M00705
]
CPF_1082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MarR
MarR_2
Staph_reg_Sar_Rot
B-block_TFIIIC
Fe_dep_repress
HTH_Crp_2
DUF7637
HTH_36
HTH_34
HTH_24
DnaD_N
HTH_IclR
DUF7343
TrmB
LexA_DNA_bind
HTH_37
Motif
Other DBs
NCBI-ProteinID:
ABG84406
UniProt:
A0A0H2YUW1
LinkDB
All DBs
Position
complement(1233775..1234200)
Genome browser
AA seq
141 aa
AA seq
DB search
MNNNTIYTNLVSTIARKLKFSADKKINNLGLNSQQGRVIQYIYEHQDEGLIQKDLANVFG
RTTASITSMLKGLEKNGYIRREIPSNNERQKNIYVEKKGIDLIETFNKNFLEIEEDLTSS
LTEEEKETFLKILTKINTNLK
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgaataataatactatttatacaaacttagttagcactattgctagaaaattaaagttt
tcagcagataaaaagattaataatttaggattaaattctcaacaaggtagagttatacag
tatatttatgaacatcaagatgaaggactaatacaaaaggacttagcaaatgtatttgga
agaactacagcaagtattacaagtatgctaaagggcttagaaaaaaacggatacatcaga
agagaaatcccctctaataatgaaagacaaaagaacatatatgtagaaaaaaaaggtata
gatcttatagaaacattcaataagaattttcttgaaattgaagaggatttaacttcctca
cttacagaagaggaaaaagaaacttttctaaaaatacttactaagattaatactaactta
aaataa
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