Clostridium perfringens ATCC 13124: CPF_1490
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Entry
CPF_1490 CDS
T00378
Name
(GenBank) putative tetracycline resistance protein
KO
K08168
MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
Organism
cpf
Clostridium perfringens ATCC 13124
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpf02000
]
CPF_1490
01504 Antimicrobial resistance genes [BR:
cpf01504
]
CPF_1490
Transporters [BR:
cpf02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-2 (14 spanner) (DHA2) family [TC:
2.A.1.3
]
CPF_1490
Antimicrobial resistance genes [BR:
cpf01504
]
Gene variants
Tetracycline resistance genes
Transporters
CPF_1490
Gene sets
Vancomycin resistance modules
Tetracycline resistance, efflux pump Tet38 [MD:
M00704
]
CPF_1490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Motif
Other DBs
NCBI-ProteinID:
ABG84522
UniProt:
A0A0H2YTZ9
LinkDB
All DBs
Position
complement(1695920..1697308)
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AA seq
462 aa
AA seq
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MDISLNTLENVEEVKIKKAVPAVLALMIFALVIDNSFKIISPDLAKAFNISATAVSWQVT
LAGLVIGIGAVVYASLSDSISVRTLLVLGIILICVGSLLGFIFQKSFLIIVISRIIQSAG
LGSAETLYVIFIAKYFKESEHKKYLGFSTSSYAISQVIGTITGGYISTYLSWQVLFLIPL
LTLVILPFILKYIPKEKNKAGNVDYIGFILVATVAATLMIFVSGFQWGVLIGFIVALALF
LIYISKNENAFISIKFFTNRNFISVLLVAFVIYSVQLAFIFMFPFLVESIYNYRLDQISL
LLVPSYVLAATVGALSGKVSKKIGSKQCIQMAIVGIIVSLIIGALFVKTSVLVFIFVMIL
FSSSFALMYAPMIDTLTRTIPKEKTGTAIGFYNFCLNIATSIGITYVAIFMETKYLGKNF
TGLFSDLVAIQYSNVLLVLAVISLVALVLYWTLIGRREKKDI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggacatttcacttaatactttagaaaatgttgaagaagtaaaaataaaaaaagcggta
cctgctgtattagctttaatgatttttgctttagttattgacaactcatttaaaattatt
tcaccagatttggctaaagcttttaacatatcagccactgctgttagttggcaagtaact
ttagctggattagttattggtattggagctgttgtatatgcttctttatctgattcaata
agtgttagaaccttattggtactaggaattatattaatatgtgttggttcactattagga
tttatttttcagaaatcatttttaattattgttatttcaagaataattcagtcagctgga
ttaggaagtgcagaaacattatatgtaatatttatagcaaagtattttaaagagagtgaa
cataaaaaatacttaggatttagtacaagtagttatgctatttcacaggtaattggtaca
attactggaggatatatctcaacatatttaagttggcaagtactatttttaattccatta
ttaactttagtaatattaccttttatattaaaatatattcctaaggaaaagaataaagct
ggtaatgtggattatataggatttatattagttgcaacagttgcagcaacattaatgatc
tttgtttcaggattccaatggggagttttaataggatttatagttgcacttgcattattc
cttatatacataagtaaaaatgaaaatgcttttataagcattaagtttttcacaaataga
aattttatatcagtattacttgtagcctttgttatatacagtgtacaacttgcatttata
tttatgttcccattcttagttgaatctatatacaattatagattagaccaaatttcatta
cttttagttccttcatatgttttagctgctactgtaggagctttatcaggaaaggtttct
aagaaaataggaagtaagcaatgtattcaaatggctatagtaggtataatagtgagtctt
attataggagctttatttgtaaaaacatcagttttagtatttatttttgtaatgatacta
ttctcaagttcttttgctttaatgtatgcacctatgattgatacattaacaagaacaata
cctaaggaaaaaacaggaactgctattggtttctataatttctgtttaaatatagctact
tcaataggaataacatatgtagcaatatttatggaaactaagtatttaggaaagaacttt
actggacttttcagtgacttagtagctatacaatatagtaatgttttactagtattagca
gttatatctttagtagcacttgtattatactggactttaatcggaagaagagagaaaaag
gacatataa
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