Cnuibacter physcomitrellae: B5808_06265 Help Entry B5808_06265       CDS       T04797                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism cphy  Cnuibacter physcomitrellae Pathway cphy03030   DNA replication cphy03410   Base excision repair cphy03420   Nucleotide excision repair cphy03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cphy00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     B5808_06265    03410 Base excision repair     B5808_06265    03420 Nucleotide excision repair     B5808_06265    03430 Mismatch repair     B5808_06265  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cphy03032]     B5808_06265    03400 DNA repair and recombination proteins [BR:cphy03400]     B5808_06265 Enzymes [BR:cphy01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      B5808_06265 DNA replication proteins [BR:cphy03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      B5808_06265 DNA repair and recombination proteins [BR:cphy03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      B5808_06265    NER (nucleotide excision repair)     GGR (global genome repair) factors      B5808_06265    MMR (mismatch excision repair)     DNA ligase      B5808_06265   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       B5808_06265 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 DNA_ligase_ZBD HHH_5 BRCT HHH Nlig-Ia PTCB-BRCT RNA_lig_T4_1 Motif Other DBs NCBI-ProteinID:  ARJ04866 UniProt:  A0A1X9LI39 LinkDB All DBs Position 1332531..1334903 Genome browser AA seq 790 aa AA seqDB search MSDATTTDALPEESAPDLAAAKAEADRLTTRILELRDEYYENDASTVTDAEYDAMVRRLG ELERLHPELQSADSPTQTVGGRAETTLFAPVTHAERMLSLDNVFSEEELDEWAAKVERDA GRASVRYLSELKIDGLAINLRYEDGVLVTAATRGDGVVGEDVTQNVLQIESIPSRLQGTG HPPLVEVRGEIFFPVEAFEELNRGQIEAGERVFANPRNAASGSLRQKREGKNDRQLALMH ARLSRLRMLVHGIGAWPDPPVAAQSEVYDLLKGWGLPTSTHYRVFDTIDEVAGFIRYYGE HRAAVEHQIDGIVVKVDDLALHAELGATSRAPRWATAYKYPPEEVNTKLLDIVVSVGRTG RATPFAVMEKVEVAGSEVRQATLHNQDVVKAKGVLIGDTVVLRKAGDVIPEVLGPVVELR DGTEREFVMPELCPECGTRLAPAKEGDIDLRCPNSRSCPAQVRGRVEHAGSRGALDIEGL GEVSAAALTQPIEPATPPLVTEAGLFSLTMSDLFPIRAVVRDNETGLEKLTESGDPKLVT PFRRRRTKKDPAFDEMAVPGSPEFWGDAQSVPSSAAVELLANIEAAKTKPLWRILVALSI RHVGPVAARALADWFGSLDAIRSATRDELAAVEGVGGIIADALIDWFTVDWHVEILDRWA AAGVQFATPGHPGPGASVGAGGVLEGLTVVATGSLEGYTREGAQEAIINAGGKAASSVSK KTDFVAAGPGAGSKLTKAEQLGLRILDAAEFHLLVTQGPDALAPAGDPADDAAGEAHEEA PAQEDDGPAE NT seq 2373 nt NT seq  +upstreamnt  +downstreamnt atgagcgacgcgacgacgaccgacgccctcccggaggagtccgcccccgacctcgcggcg gccaaggcggaggccgaccgcctcaccacccgcatcctcgagctgcgcgacgagtactac gagaacgacgcctcgaccgtcaccgacgccgagtacgacgcgatggtgcgccgcctcggc gagctcgaacggctgcaccccgagctgcagtccgccgacagccccacccagaccgtcggc ggccgcgccgagaccaccctgttcgcccccgtcacccacgccgagcggatgctcagcctc gacaacgtgttcagcgaggaggagctcgacgagtgggccgccaaggtcgagcgcgacgcg gggcgagcctccgtgcgctacctcagcgagctcaagatcgacggtctcgcgatcaacctc cgctatgaggacggcgtgctcgtcaccgcggccacccgcggcgatggcgtggtcggcgag gacgtgacgcagaacgtgctgcagatcgagtcgatcccgtcgaggctgcagggcacgggg catccgcccctcgtcgaggtcaggggcgagatcttcttcccggtcgaggccttcgaggag ctcaaccgcggtcagatcgaggccggggagcgcgtgttcgccaacccccgcaacgccgcc agcggatcgctgaggcagaagcgcgagggcaagaacgaccggcagctggcgctcatgcac gctcggctgtcacggctgcggatgctcgtgcacggcatcggcgcctggccggatccgccg gtcgcggcgcagtccgaggtgtacgacctcctcaagggatggggtctgccgacgtcgacg cactaccgggtgttcgacacgatcgacgaggtcgccgggttcatccgctactacggcgag caccgcgccgccgtcgagcaccagatcgacggcatcgtggtgaaggtcgacgacctcgcg ctgcacgcggagctcggcgccaccagccgtgccccccgctgggccacggcctacaagtac cctcccgaggaggtcaacaccaagctcctcgacatcgtcgtctcggtcggccgcacgggg agggccacgcccttcgccgtgatggagaaggtggaggtggcggggtcggaggtccgccag gccacgctccacaaccaggacgtcgtgaaggccaagggcgtgctcatcggcgacacggtc gtgctccgcaaggcgggcgacgtcatcccggaggtgctcggcccggtggtagagctccgc gacggcaccgagcgggagttcgtgatgcccgagctctgccccgagtgcgggacccggctc gcccccgccaaggagggcgacatcgacctccgctgcccgaactcgcggagctgccccgcg caggtgcgcgggcgggtcgagcacgcgggctcgcgcggcgcgctcgacatcgaggggctc ggcgaggtctccgcggccgcgctgacgcagccgatcgagccggccaccccgccgctcgtc accgaggcgggcctgttctcgctcaccatgagcgacctcttccccatccgtgcggtcgtc cgcgacaacgagaccggtctcgagaagctcaccgagtccggtgacccgaagctcgtcacc ccgttccgtcggcgccggacgaagaaggatccggccttcgacgagatggccgtgccgggc tcgcccgagttctggggcgacgcccagtccgtgccctcgtcggcggccgtcgagctgctg gccaacatcgaggccgcgaagaccaagccgctgtggcgcatcctcgtcgccctcagcatc cggcacgtcggccctgtggcggcgcgggcgctcgccgactggttcggctccctcgacgcc atccgctccgccacccgcgacgagctcgccgccgtcgagggcgtgggcggcatcatcgcc gacgcgctgatcgactggttcacggtcgactggcacgtcgagatcctcgaccgctgggcg gccgcgggcgtgcagttcgccacgcccgggcatccgggtccgggggcttcggtgggcgcg ggcggcgtgctcgaggggctcaccgtggtcgccacgggatcgctcgagggctacacgcgc gaaggggctcaggaggcgatcatcaacgcgggcggcaaggcggcgtcgagcgtgagcaag aagaccgacttcgtggccgccggcccgggggccggctccaagctcaccaaggcggagcag ctgggcctgcgcatcctcgacgcggccgagttccacctcctcgtcacccagggcccggat gcgctcgccccggccggcgatcccgccgacgacgcggccggcgaggcccacgaggaggct ccggcacaggaggacgacgggcccgccgagtag

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