Chitinophaga pinensis: Cpin_3340
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Entry
Cpin_3340 CDS
T00959
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cpi
Chitinophaga pinensis
Pathway
cpi01501
beta-Lactam resistance
cpi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Cpin_3340
01503 Cationic antimicrobial peptide (CAMP) resistance
Cpin_3340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpi03036
]
Cpin_3340
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpi02000
]
Cpin_3340
01504 Antimicrobial resistance genes [BR:
cpi01504
]
Cpin_3340
Chromosome and associated proteins [BR:
cpi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Cpin_3340
Transporters [BR:
cpi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Cpin_3340
Antimicrobial resistance genes [BR:
cpi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Cpin_3340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
HlyD_2
DUF4912
Motif
Other DBs
NCBI-ProteinID:
ACU60807
UniProt:
A0A979G4K2
LinkDB
All DBs
Position
complement(4108733..4109848)
Genome browser
AA seq
371 aa
AA seq
DB search
MRTSRNIYILAISAALGGCITKGENVNNESTLNTYPVLQLSLCDTVLHKNYVADIEAVRN
VEIRARVNGFLNKIYVDEGQHVQQGQLLFSLNDEEYRSELAKAKAALSSAIAEAKGAQLE
VDRVQLLVEKKVIAKSELEVAKARLAAGNARIDEARSSEANAATRLSYTVIRAPFDGYID
RIPSKSGSLIGEGELLTSVSDIKEVYAYFNVSETEYLQHSRANKGKEHPIVHLVLADGSD
YPYTGKVETIESEFEETTGSIAFRARFPNPQYLLKHGASGKVQLSNAMSDAMLLPQKAVF
EMQDKNYVFILDKSNQVKMKNFVPGARLANCYIVQSGLNAGDKVVYEGVRNLRDGMKINP
AAITLDSIKAL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacgtccaggaacatatatatattagctatcagcgctgcccttggtggttgtatc
actaaaggtgagaacgtgaacaatgaatcaacattaaatacctacccggtcctacaactg
tcactctgtgataccgttcttcacaaaaattacgtggcagatatcgaagccgtacgtaat
gtggaaatacgtgcccgtgttaacggcttcctgaacaagatttatgtggacgaagggcaa
catgttcaacaggggcagttgctcttctccctcaacgatgaggaatatcgctccgaactg
gcaaaagccaaagcagcactcagcagcgccatcgcagaagcaaaaggcgcacagcttgaa
gtagatcgtgtgcagctgctggtcgagaaaaaggtcatcgctaaaagtgaactggaagta
gccaaagcaagactggctgctggcaatgcccgcatcgatgaagcccgttcctctgaagcc
aatgcagccacaagattgtcctatactgttatccgcgctccttttgacggatatatagac
aggatcccatcaaaatccggtagcctgatcggagaaggtgaactactgacctccgtttct
gatatcaaagaagtatacgcttatttcaatgtttctgaaacagaatacctgcaacacagt
cgtgcgaacaaaggaaaagaacatcctatagtacacctcgtactggcagacggtagtgat
tatccctacaccggtaaggtagaaacaattgaaagcgaattcgaagaaacaaccggctcc
atcgctttcagagccagattccccaacccacagtacttactgaaacacggcgccagcgga
aaggtacagctgagcaatgctatgagcgatgccatgctcctgccgcaaaaagccgtattt
gaaatgcaggacaaaaactatgtattcatcctggataaatctaaccaggtaaaaatgaaa
aacttcgtaccaggcgcacgactggccaactgttacatcgtacagtcaggtctcaatgca
ggcgacaaagttgtctacgaaggcgtacgcaacctgcgcgatggtatgaagatcaatcct
gctgccatcacactcgacagcattaaagcactgtaa
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