Chrysemys picta (western painted turtle): 101935404
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Entry
101935404 CDS
T04662
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101935404 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpic03041
]
101935404 (EFTUD2)
Spliceosome [BR:
cpic03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101935404 (EFTUD2)
Complex C
U5 SnRNP specific factors
101935404 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
Motif
Other DBs
NCBI-GeneID:
101935404
NCBI-ProteinID:
XP_005282925
UniProt:
A0A8C3FNH5
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGREAKDLDELDDDDDDDDIGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSFLFNVMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFVLEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWILIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacacagacctgtatgatgagtttgggaattacattgggccagagctcgactctgac
gacgatgatgatgaactgggcagagaggccaaggatcttgatgagcttgatgatgatgat
gatgacgatgatataggggatcatgatgaagatcatcctggaatggaggtggtactgcat
gaggataagaaatactatccgactgctgaagaggtttacggacctgaggtagagaccata
gtgcaggaggaagatacccagcctctcactgagcctattattaaacctgtgaaaaccaag
aaattctccctgatggagcagacgttgcctgtcactgtatatgagatggatttcctggca
gatctgatggacaactctgagctgattcggaatgtgaccctgtgcgggcatctccaccat
ggcaagacttgttttgtggattgcctgatagagcagacgcacccagagatcaggaagcgc
tacgaccaggatctttgctacactgacatactgttcacggagcaagagaggggtgttggc
atcaagagtaccccagtgactgtggttctaccagacaccaaggggaaatcctttctcttc
aatgtcatggacacgccaggccatgtgaacttttctgatgaggttactgccggccttcgt
atttcggacggagttgtgcttttcattgatgcggccgagggggttatgctgaacacagag
aggctgatcaagcacgcagtgcaggagaggctggcagtgaccgtgtgcattaataagata
gatcggctgatcctggagctgaagcttccccccaccgatgcctattacaaactccgacac
atagtagatgaggtcaacggcttgatcagcatgtattccactgacgagaacctgatcctc
tcccctcttttggggaacgtctgcttctccagttcccagtacagcatctgcttcacgctt
ggctcctttgcaaagatttatgcagacacgtttggagacatcaattaccaggagtttgca
aagcggctttggggtgacatctacttcaaccccaagacacgaaagttcactaaaaaggcc
ccgaccagcagttcccagcggagctttgtggagtttgtcctagagcccctgtacaagatc
ctggcgcaggtggttggtgatgtggacaccaccctcccccgcactctggatgagctgggc
atccacctgaccaaagaggagctgaagctaaacattcgacccctgctaaggcttgtctgc
aagaagttctttggggagttcacaggctttgtggacatgtgtgtgcagcacattccctcc
ccaaaggtgggagccaagaccaaaatcgagcacacctacaccggcggcgtcgactcagac
ctgggggaggccatgagcgagtgtgaccctgatggtccactaatgtgtcacaccacgaaa
atgtacagcacagacgacggggtccagttccacgcctttggcagggtgctgagtgggacc
atccatgcagggcagcccgtgaaggtactgggagaaaactacacgttggaggatgaagag
gattcccagatctgcactgtgggacggctctggatctcggtggcaagataccacatagag
gtgaaccgagtccctgccggcaactggatccttatagagggggtggaccagcccattgtg
aagactgcaaccatcactgagcctagaggcaacgaggaggctcagatcttccgtccattg
aagttcaacaccacgtctgtcatcaaaatagccgtggagccagtcaacccttcggagctc
cctaaaatgttggatggcctgcggaaagtcaacaagagctacccgtcgctcaccaccaag
gtggaagaatctggagagcacgtgatcctggggacgggggagctgtacctggactgtgtg
atgcatgacttacggaagatgtattcagagattgatatcaaggttgctgatccggttgtg
acgttctgtgagactgttgtggaaacttcctccctgaagtgttttgctgagacacccaat
aagaagaacaagatcacaatgattgctgagccactggagaaggggctcgcggaggacatt
gagaacgaggtggtccagatcacctggaacaggaagaagctgggcgagttcttccagacc
aagtatgactgggatttgctggctgcccgctccatctgggcctttgggccagacgctact
ggcccaaacattctggtagatgacacgctgccctcggaggtggataaggccctgctgggc
tctgtgaaggacagcatcgtacaggggttccagtggggcacaagggaaggacccctctgt
gatgagttgatccgcaatgtgaagtttaagatcctggatgccgtgatcgctcaggagccg
ctgcaccggggaggagggcagattatcccgacggcgaggagggttgtgtactccgccttc
ctcatggccactcctcggctgatggaaccgtactactttgtggaggtccaggcccctgct
gattgtgtgtctgcagtgtacactgtgctggcccggcggagaggtcatgtgactcaggac
gctccaatcccaggctcccccctttacaccatcaaagcctttatcccagccattgactcg
tttgggtttgagactgacttgaggactcacacgcagggacaggctttctctctgtctgtc
ttccaccattggcagatagtgcctggagaccccttggacaagagtatcgtcatccggccc
ttggagccccagccagcacctcacctggccagagagttcatgatcaagaccaggcgcaga
aagggcttgagcgaggacgtgagcatcagcaagttcttcgacgaccctatgttgctggag
ctggccaagcaggatgtagttctgaactaccccatgtga
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