Chrysemys picta (western painted turtle): 101942702
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Entry
101942702 CDS
T04662
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03440
Homologous recombination
cpic03460
Fanconi anemia pathway
cpic04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101942702 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
101942702 (BRCA1)
03460 Fanconi anemia pathway
101942702 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpic01009
]
101942702 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpic04121
]
101942702 (BRCA1)
03036 Chromosome and associated proteins [BR:
cpic03036
]
101942702 (BRCA1)
03400 DNA repair and recombination proteins [BR:
cpic03400
]
101942702 (BRCA1)
Enzymes [BR:
cpic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101942702 (BRCA1)
Protein phosphatases and associated proteins [BR:
cpic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101942702 (BRCA1)
Ubiquitin system [BR:
cpic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101942702 (BRCA1)
Multi subunit type E3
BRCC complex
101942702 (BRCA1)
Chromosome and associated proteins [BR:
cpic03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
101942702 (BRCA1)
DNA repair and recombination proteins [BR:
cpic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
101942702 (BRCA1)
BRCA1-A complex
101942702 (BRCA1)
BRCA1-B complex
101942702 (BRCA1)
BRCA1-C complex
101942702 (BRCA1)
BRCA complex
101942702 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
101942702 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
BRCT_2
zf-RING_5
zf-C3HC4_3
RING_XB3-XBAT31
zf-Nse
BRCT_3
zf-RING_6
zf-RING_10
zf-MIZ
U-box
zf-ANAPC11
Prok-RING_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
101942702
NCBI-ProteinID:
XP_023967135
LinkDB
All DBs
Position
Unknown
AA seq
1906 aa
AA seq
DB search
MDSSVAAIGDVQNVLLAMQKNLECPICLELIKEPVSTKCDHIFCRFCMFKLLSKKKKGPA
QCPLCKTEVTKRSLQENPRFKQLIEGLMETIHAFELDTGIKFLNSQDFSKKPLETNSTEL
LWKEGSIIQSKGYRNRQKRIQEQENPTLEANAGAQVVDNMVRRSSLRNKRQKCESGKAVY
IEFGSDSSEDLLFKKAGGGGMGDKGFQTPPQKGKCEEELKYGLSLSFSAYNIKSDAGEIL
SSDILGECGVSEEDSKGTGNGIEDLEAAQVNVADGHLKESQGISASNSQAEQCDRTANSS
SLLNEDTSLFHSAEEMDVGETRFSSKNKESGLAHSSENQLDKSKKTGNGVQHTEAVETCQ
PESNSLHVREPASESLLQLKTLPGNPLSQVSGKRLKRSIQKVNEWFSKSNEMLSSSSSQD
APAGAADTEDGDSYLSDRESCISEKTDLMVNRTEVVVGCENDKSLSKSIVHNIEDKIFGK
TYKRERKSNPPVHTREMPRSPKVEDVTTEVKPSNNSGTSKLKRKRKTASDLQPVDFIKKR
DEKDLKKHSEGVNQCLVSRNTERKKGGEGSTVVNGSPMGVKNGDNIPAELPLREGKSILK
NDTEKVDCNSTDKEPAQNTCDRKSTKKMRSSQTKRSRHSSRPVCALQLVVDRNASCPDQT
ELQIDSYPSSEEPRKVDSEKKRVRRSRRLQLLTEKMTKETRRRGEPNEGARKHASESKDS
SSGLQRNVLVHVPECKGPDEQQDVPNHTIPLSDTDLRGNDLQADKTRPDPENCSDGLQTG
KGLLYVEMSVEDLNACSVVPDTDSQVSENQGSHSLLQPHSTNVDQAACPVQNLSENNQCA
AIEPKKRELCASSPKTNRHCTENDLERFRNPKSHEAKIISELNTETEDSELDTQYLRNMF
RHSKRLSFTLHPSPVKESVTESTASETLRKSGASCVEYRHKNRDLKNEPPYVKKTVGLDE
VCEREEPKTCESAKGISGHSPGTHFSRDTNYGHVSDDGKTVSQIPDQVQLFSPPRAATAK
IKSRGRLQKRRQPKEKRISPEMVIESQLSENLNKSNGSLGDRSNIEERIFQITDLNTVNE
TGSNQGVKAEEAENKGPVLNLQPKPVLVYPVVCQQSPAEFSCKVIEKNSYEGECKQVKSD
EEQVSQIASVGVPECLISEETLEQSTEDTSGFPLLSETPDGLLCSAGDVKANISICEIDR
KEISAVFVKEGQNASLRELDSGSSSSKSRSQNFVREPRRPAGKLQSSEEDSSEDEELPCF
QALIVGKSASTPLQPTEQIMSTVGSSSPAEILALLNRSSGNNKAVQKTPGVLSRDACVSP
SQESECSVNLFSSQSNMSEDSTNRPQELKKPVTFAPCSKEMSSFNGSREASPNGNEELTG
RKTDLEDGHQRDQNVQPNLASVFQGEASGYDSEASHPGDSSGLSSQGEILTTQQKDAMQN
SLKKLQQEMAVLEAVLEEHGSQGSEFPPPPCDPPHSRVEGTLTVGQMRPARGTALISEVN
LENHKISSSKGLSSDGFHVMPSDHSNINNKELEEEGSRSPALQLSHPKSHLLKKEALEQG
HWCPRLWKARTHSQEGTLQRVGVAVLLEEEAMKQCNQYRIEPENAAEQEFGTKINSAAVP
CENVRRSPNSSPLKFSERLTRCQTAESTNRAAVSGHVVNGKSTQGCKQGRRAFSSASALH
TGVVKENAKSPVVTCGRQMSIVASGLNQSELLLVQKFARKTQSTLSNQITEGTTHVIMKT
DMELVCERTLKYFLGIAGRKWVVSYEWIVQSFKEGRILDEYDFEVRGDVINGRNHQGPKR
ARRSQAGKLFKDFEICCYGPFTDMRTGDLERMAELCGASVVKQPHLFTHKANSTAVIVVQ
PDAWLENAGYRAIQQKCTAVVTREWVLDSVACYECQEFDTYLVSQS
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atggactcgtctgtggctgccattggagatgtgcaaaatgtgcttttggctatgcagaag
aacttggagtgcccaatatgtttggagttgataaaagagccagtctcaacaaaatgtgac
catatattctgcagattctgtatgtttaaacttctcagcaaaaagaaaaaaggcccagct
cagtgtccactgtgtaagactgaggttaccaaaagaagtcttcaggaaaatccaagattt
aagcagctaattgaagggctaatggaaactatccatgcttttgaacttgacactggaatc
aagtttttaaacagtcaggatttttctaaaaaacctctagaaaccaattctactgagctc
ctgtggaaggaaggttccattatccaaagtaagggctacagaaacagacaaaaaagaatt
caagaacaagaaaatcctaccttggaagctaatgctggtgcccaggttgtagacaacatg
gtcaggaggagttccctcagaaacaaaaggcagaaatgtgaatctggtaaagcagtgtac
atcgaatttggatctgattcttctgaagatcttctttttaaaaaagcaggtggtggtgga
atgggagacaaaggatttcagactccacctcaaaaaggaaagtgtgaggaagaactaaag
tatggactttcactttccttctcagcatacaacatcaagtcagatgcaggagaaatactc
tcgtcagatatcttaggtgaatgtggtgtctcagaggaagacagcaaaggcactgggaat
ggcatcgaagacttagaggctgctcaagtgaatgtggctgacggtcatttaaaggagagc
cagggcatttctgcttcaaactcacaggcagagcagtgtgacagaacagccaactccagc
tctttactgaatgaggacacaagtttattccacagtgcagaagaaatggatgttggggaa
actcgattcagtagtaaaaacaaagagtctggcttagcacacagctcagaaaaccaatta
gataaaagcaagaagacaggtaatggtgtccagcatacagaagctgtagaaacatgtcaa
cctgagagtaactccctgcatgtaagggagcctgcttcggagagtctattgcagctcaag
actcttcccggcaatcctttgagtcaagtttctgggaaaagactgaagagaagcattcaa
aaagtcaacgagtggttttctaaaagcaatgagatgctctcttctagttcctcccaggat
gctcctgctggggcagctgacacagaagatggagattcatatttatcagatagagagtcc
tgtatttcagagaagactgacctgatggtaaaccgcacggaagttgtggtgggatgtgaa
aatgacaagagtttgtcaaaatcaattgtgcataacattgaagataaaatatttgggaaa
acttataaaagagagaggaagtcaaaccccccagtccacacgagagagatgccacggagt
ccaaaagtggaagatgttactactgaggtgaaaccctcaaataattccggaacaagtaaa
ttaaaacggaaaagaaagactgcctctgatctgcaacctgtggacttcatcaagaagaga
gacgaaaaggatctaaagaagcactctgagggtgttaatcagtgccttgttagtagaaat
actgaaaggaaaaaaggtggtgaaggttccactgttgttaatgggagtcccatgggtgtg
aaaaatggggacaatataccagcagaacttcccctccgagaggggaaatccatattgaaa
aatgatactgagaaagtagattgcaacagcactgataaagagccagcacagaatacctgt
gaccgaaagagtactaaaaaaatgagaagctcacagacaaaaagaagcagacattcaagt
aggcccgtgtgtgctctgcagctggtagtggatagaaacgcaagttgccctgatcagact
gagctgcagattgatagctacccaagcagtgaagagccaagaaaagttgattcagaaaag
aaacgagtcagacgcagcaggagacttcagttactgactgaaaaaatgacaaaagaaacc
aggagaagaggtgagccaaatgagggagcaagaaagcatgccagtgaaagcaaagattcc
tcctctggattacagaggaatgtattggtccatgtccctgaatgcaaaggccctgatgag
cagcaggatgtaccgaaccataccatacctctgtcagacactgatctgaggggcaatgac
ttgcaagcagataaaacacgccctgatcctgaaaattgttctgacggtctgcaaactgga
aagggcctcttgtatgtcgaaatgtcagtggaggatttaaatgcttgttctgttgtgcct
gatacagattctcaagttagcgaaaatcaaggcagccattcactcctgcagcctcattcc
acaaatgtggatcaagctgcctgcccagtgcagaatttgtctgagaataatcagtgtgct
gccatcgagcctaaaaagagagagttgtgtgcgtcttcacccaagaccaatagacattgc
acagaaaatgacttggaaaggttcagaaacccaaagtcacatgaagctaaaatcatttca
gagttgaacacagaaactgaagacagtgagctagacacacagtacctccgaaatatgttc
agacattcaaaaagactgtcatttacccttcatcctagtccagtgaaggaatcagtgaca
gaaagcactgcttctgaaacgctaaggaaatcaggtgctagctgtgtagaatataggcat
aaaaatagagacttaaaaaatgaacctccatatgttaaaaaaacagtgggcctggatgag
gtttgcgagagagaagagcctaaaacgtgtgaatctgctaaaggtatttctgggcatagt
ccaggaactcacttttccagggacaccaactatggacatgttagtgacgatggcaagact
gtttcacaaattccagatcaagtgcagttattctccccaccaagagcagccacagccaag
attaagagtaggggcagactgcaaaaacgaagacaaccaaaggaaaagagaatttcacct
gaaatggtgatagaaagtcaattaagtgagaacctaaacaaaagtaatggaagcctaggt
gaccggagtaatatagaagagcgaattttccaaataactgatttaaacacagttaatgaa
acaggaagcaatcaaggagtaaaagctgaagaagctgaaaacaaagggccagtattaaat
ttacagcccaaaccagtgctggtatatcctgtagtttgtcaacaaagccctgctgaattt
agctgcaaagtaattgaaaagaatagttatgaaggggaatgcaaacaagtaaagagtgat
gaagaacaagtatcccaaattgccagcgtaggtgtgcctgagtgcttaatttcagaggag
actctggaacaatccactgaagatactagtggttttccattgctgtctgaaacccctgat
ggcttattatgctctgctggtgacgttaaagcgaacataagcatttgtgaaattgatagg
aaagaaatttctgctgtatttgttaaagaaggtcagaatgcctcattaagagaactggac
agtggcagcagtagttctaagtctaggtctcaaaactttgttcgggaacccagaagaccg
gccgggaaattgcagtcctccgaggaggattctagtgaagatgaagaactaccatgcttt
caggcattaatagttggcaaatcagcaagcacaccattgcagcctacagaacagatcatg
tctacggtagggtcttcatccccggcagagattctagcattgctgaaccgtagcagtggc
aataataaagctgtacagaaaacgcctggagtcctctcgagagatgcatgtgtttctcca
agccaagagtcagaatgctcagttaacttattttcttcccagtccaacatgtcagaagat
tcaaccaatagaccacaagagttgaagaagcccgtaacatttgctccttgttccaaagaa
atgagcagtttcaatggaagcagagaagctagtccaaatggtaatgaagagctgacagga
agaaaaactgatttggaagatggacaccaacgagaccagaatgtgcaaccaaatttagct
tccgtttttcaaggtgaagcatccggatatgacagtgaagccagtcacccaggagattct
tctgggctatcctcccagggtgagatccttaccacacagcagaaggatgccatgcaaaac
agcttaaaaaaacttcaacaggaaatggctgtgcttgaggctgtgctggaagagcatgga
agccagggctctgaattcccacccccaccctgtgacccgcctcattccagagtggaaggg
acactcacagtgggacagatgagaccagctagaggaacagcattaatttcagaagtaaat
cttgaaaatcacaaaatcagcagttcaaagggactttcatctgatgggttccatgtaatg
ccaagtgatcattccaacataaacaataaagagctagaagaagaaggttcgaggtcgcct
gctttacagctttcccatcctaaatcccatctattaaaaaaagaagctctggagcaaggc
cactggtgcccgaggctttggaaagccagaactcactcccaggagggaacacttcagcgg
gttggtgtggcagtgctgttggaagaagaggcaatgaaacaatgtaatcagtatagaatt
gaaccagaaaatgcagctgagcaggaatttggaacaaagataaacagtgcagctgttccg
tgtgagaatgtgaggaggtctccaaacagctctcccttgaaattttctgaaagacttacc
cgctgtcaaactgcagaatcaaccaatcgtgcagccgtatcggggcatgttgttaatggg
aagagtactcagggatgtaagcaggggagaagggcattttcctctgcatctgctctgcac
actggagttgtaaaagaaaatgccaaaagcccagttgtgacctgtggaagacaaatgtca
attgtggcatcaggtctgaaccagagtgagcttttactggtgcagaagtttgccaggaaa
acccagagcactttatctaatcaaattactgaaggaacaacccatgtcataatgaaaaca
gatatggagctagtgtgtgagcggacactgaagtactttctgggcattgcaggaagaaaa
tgggtagttagctatgaatggattgttcagtcttttaaggaaggaaggatacttgatgag
tacgactttgaagtgagaggagatgtgatcaatgggagaaaccaccaaggccctaagaga
gctagacgatcccaggctggaaagctcttcaaagactttgagatctgttgctatggacct
ttcaccgatatgcgcacaggtgatctagaacggatggcggagctttgtggcgcctcagtg
gtgaagcagcctcatctgttcacacacaaagctaactctactgctgtaatagttgttcag
cctgatgcttggctcgaaaacgcagggtacagagcaatccaacagaagtgtactgccgtg
gtgacccgagagtgggttttagacagcgttgcatgctatgagtgccaggagtttgatacc
taccttgtctcccagtcatga
DBGET
integrated database retrieval system
