Chrysemys picta (western painted turtle): 101953341
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Entry
101953341 CDS
T04662
Symbol
ABCD4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X3
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic02010
ABC transporters
cpic04146
Peroxisome
cpic04977
Vitamin digestion and absorption
cpic04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101953341 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101953341 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
101953341 (ABCD4)
04980 Cobalamin transport and metabolism
101953341 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpic04131
]
101953341 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpic02000
]
101953341 (ABCD4)
Enzymes [BR:
cpic01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
101953341 (ABCD4)
Membrane trafficking [BR:
cpic04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
101953341 (ABCD4)
Transporters [BR:
cpic02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
101953341 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
SbmA_BacA
AAA_7
AAA_22
IRK
FtsK_SpoIIIE
AAA_29
ArsP_1
DEAD
AAA_23
T2SSE
Motif
Other DBs
NCBI-GeneID:
101953341
NCBI-ProteinID:
XP_005301632
UniProt:
A0A8C3IR76
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MAVGSVAVGRAGGRRPQPQLDLQFLRRFGKIQAILFPRWSSQNVLMFLTLLSIALLEQLV
IYQVGLIPSQYYGVLGSKDFSGFKTLTTIAVILIILNSTLKSLDQFICNLMYVSWRKTLT
EYLHGYYFQGQVYYTLNVLREDIDNPDQRISQDVERFCRQLSSMASKLIISPFTLGYYTY
QCFQSTGWLGPVSIFGYFVIGTVVNKVLMSPIVSKLVHQEKLEGDFRFKHMQIRVNAEPA
AFYRAGQVEHMRTDRRLQSLLQTQRELMGKELWLYIGINTFDYLGSILSYVVIAIPIFSG
VYGDLDPAQLSALVSKNAFVSIYLISCFSQLIDLSATLSDVAGYTHRIGELQETLLSLSR
KHRDCESEDKTNWDFENGPGEQTVLGDTAFLLERVSLSVPSSDKLLIKDLDLRISQGNNL
LIVGNTGTGKTSLLRVLGGLWESTRGNIHMLTCFGPHGVVFLPQRPFFTDGTLREQVIYP
LKKIYPVSGSADDERILQFLELAGLSDLLARTGGLDQQVDWNWYDILSPGEMQRLSFARL
FYLQPRYAVLDEATSALTEEVENELYRTCTQLGMTLVSVGHRTSLEKFHTWILKLSGRGR
WELTRTERARRLPASEGC
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgggagcgtggcggtggggcgcgctggcggccgcaggccccagccccagctg
gacctacagtttctgcgacgcttcgggaagatccaggccatcttgtttcccagatggtcc
tcccagaatgtgctcatgttcctgaccctgctgagcattgccctgttggagcagttggtc
atttaccaggtgggattgatccccagccagtactacggggtcctggggagcaaggacttc
tctgggttcaaaaccctgactacgattgctgtgatactcatcatactcaattccacgctg
aaaagcttggaccagtttatctgtaacctgatgtatgtaagttggaggaagactctcacc
gaataccttcatggctactatttccagggccaggtgtattacacgctgaacgtgctgcgc
gaggacatcgataatccagaccagcgaatcagtcaggatgtggagaggttctgcagacag
ctaagttccatggccagtaaactcatcatctctccttttacactgggctactacacctat
cagtgctttcaaagcaccggctggctgggcccagtaagtatctttgggtattttgtcatt
gggacagttgttaacaaggtgctgatgagtcccattgtgtcgaaactggtgcatcaggag
aagctggagggggatttcaggttcaagcacatgcagattcgtgtaaatgcagagccagct
gctttctacagagctgggcaggtagagcacatgagaactgaccgccggttgcagagcctc
ctgcagacacagagggagctgatgggcaaagaactgtggctctacattgggatcaacacc
tttgactatctgggcagcattctgagttacgtggtgattgccattcccatctttagtggt
gtctatggtgacctggatccagcacagctgagcgctctggtcagcaagaatgcctttgtc
tccatttacctcatcagttgcttcagccagctcatcgatctctccgccaccttgtctgac
gtggctggctacacacacagaattggggagctgcaggagacactgctgtctctctccagg
aaacaccgtgattgtgaatcagaagacaaaaccaactgggactttgagaatggtcctgga
gagcagactgtgttgggggatacagccttcctcctggagcgagtctctctctcggttcca
tcctcggacaagctgctcatcaaggacctggacctacggatttcccaagggaacaatctg
ctgatcgtggggaacactggcacggggaagacatcactcctgagggtccttggtggcctc
tgggagagcacacgggggaacatccacatgctgacctgctttggcccccatggggtggtg
ttcctgccacagagacctttcttcacagatggaaccctgcgagagcaggtgatttatcct
ctgaagaaaatttatccagtttcagggtctgcagatgatgagaggatcctgcaattcctg
gagctagctgggctgtctgatttgttggcacgcacagggggtctggaccagcaggtggat
tggaactggtatgacatcctgtccccaggggagatgcagagactctcatttgcaaggctc
ttctacctccaacccagatatgcagtgttggatgaagccaccagtgctctgacagaggag
gtggagaatgagctataccgcacttgcactcagctggggatgacgctagtcagtgtggga
catcgcaccagcctggaaaagtttcacacttggattttgaaactctccggaagaggaaga
tgggaactaacaagaactgagagagcgaggcggctcccagccagtgagggatgctga
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