Chryseobacterium piperi: CJF12_09195 Help Entry CJF12_09195       CDS       T05071                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism cpip  Chryseobacterium piperi Pathway cpip03030   DNA replication cpip03410   Base excision repair cpip03420   Nucleotide excision repair cpip03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cpip00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CJF12_09195    03410 Base excision repair     CJF12_09195    03420 Nucleotide excision repair     CJF12_09195    03430 Mismatch repair     CJF12_09195  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cpip03032]     CJF12_09195    03400 DNA repair and recombination proteins [BR:cpip03400]     CJF12_09195 Enzymes [BR:cpip01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CJF12_09195 DNA replication proteins [BR:cpip03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CJF12_09195 DNA repair and recombination proteins [BR:cpip03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CJF12_09195    NER (nucleotide excision repair)     GGR (global genome repair) factors      CJF12_09195    MMR (mismatch excision repair)     DNA ligase      CJF12_09195   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CJF12_09195 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD PTCB-BRCT HHH 5_3_exonuc RNA_ligase zf-ribbon_3 BRCT_2 Motif Other DBs NCBI-ProteinID:  ASW74443 UniProt:  A0A086BKY9 LinkDB All DBs Position 2111470..2113473 Genome browser AA seq 667 aa AA seqDB search MSENIQLKIEQLRKELHQHNENYYLLDEPTISDFEFDLLLKELQDLEVKYPEFYDVNSPT MRVGGGITKVFPTIQHKFRMYSLDNSYDFDDLEDWEKRIIKTINDPVEFVAELKYDGASI SILYENGKLVQAVTRGDGFQGDEITSNVRTISDIPLTLKGDFPNHFFMRGEIFLTRKNFD KINKLREEEGLDPFMNPRNTASGSLKMQDSGEVRKRGLSSVLYQYVSEEVPTNTHWELLQ KAQSWGFKTSQQAKLCRTLDEVKDFITFWDVERHNLPFEIDGIVLKVNSLQQQRQLGYTA KSPRWAMAYKFKAEKVETQLQSVSYQVGRTGAITPVANLKPVLLAGTIVKRASLHNEDII KKLDLHDHDFVYVEKGGEIIPKIIAVNTEKRAPESTEIQYIKHCPECGTELVKVEDQAIH FCPNELHCPPQVVGRMIHYVSRKALNIENLGSETIEQLYREKLIENPADFYTLTKEQLLP LERMAEKSAQNIISGIEKSKEIPFEKVLYGIGIKHVGETVAKKLVKNFPTIDDLKNATAE ELCQVEDIGSKIAYSIEAFFNNSENILMLERLKSYGVQLEKGESTNEVISNVLDGKTFLF TGKLSLFTREQAEEMVEKHGGKNISAVSKNLNFLVVGEKAGSKLKKAQDIGTIEVLDEQQ FLDLIEK NT seq 2004 nt NT seq  +upstreamnt  +downstreamnt atgtccgaaaacattcaattaaagatagagcagcttcgaaaggagcttcatcagcataat gaaaattactatttactggatgaacctaccatttcagattttgaatttgacctgttactg aaagagcttcaggatcttgaagtaaaatatcctgaattttatgatgtcaactctcctacc atgcgggttggaggtggaattactaaggttttcccaaccatccagcataaattcagaatg tattccctggacaattcttatgattttgatgatcttgaagattgggaaaaacggattatt aaaaccattaatgatcctgtagaatttgttgccgaattaaaatatgacggtgcctctatt tccattctttacgaaaacggaaaactagttcaggccgtaacccggggagatggttttcag ggagatgaaatcacatccaatgtccgtacaatttccgatattcctttgacattaaaaggt gactttcccaatcatttttttatgcgcggggaaatttttctcacgagaaaaaactttgat aaaatcaataagctccgtgaagaagaaggtctggatccatttatgaatccaagaaataca gccagcggaagtttaaaaatgcaggatagcggtgaagtaagaaaacgcggactttcgtct gttctatatcaatatgtttcagaagaagttcctactaatactcattgggaactgcttcag aaagcacaaagctggggttttaaaacctctcagcaggctaagctttgtcggacattagat gaggtaaaggattttatcactttctgggatgtagaacgccataacctaccatttgaaatt gacggaattgtattgaaagttaattcattacaacagcaacgacagcttggatacactgca aaatctccgcgttgggcaatggcttataaatttaaagcggaaaaagtagaaacacagctg caaagtgtttcatatcaggtagggagaaccggagccatcactcctgttgctaatttaaaa ccagtattactggcaggaaccattgtaaaaagagcatcacttcataatgaagatattatt aaaaaacttgatcttcatgatcatgattttgtctatgtagaaaaagggggtgagatcatt cctaaaatcattgcggtaaatacagaaaaaagagctccggaaagcacagaaattcaatat atcaagcactgtccggaatgtgggacagaactggtaaaagtggaggatcaggccattcat ttctgccctaatgaacttcattgcccaccacaggtcgttggaagaatgatccattatgtt tccagaaaagctttaaacattgaaaatttaggaagcgaaacgatcgaacaactgtatcgt gaaaagctgattgaaaatccggcagacttctatactttgacaaaagagcaactacttcca ttagaaagaatggcagagaagtctgcccagaatatcatttcagggattgagaaatcaaaa gagattcctttcgaaaaagtgttgtacggaataggaatcaaacatgttggtgaaactgtt gccaaaaaactggtcaaaaacttcccaaccattgatgatttaaaaaatgcaacagctgaa gagctttgccaggtagaagatataggatctaaaattgcttacagtattgaagcctttttc aataattctgaaaacatccttatgctggaacgtttgaaatcatatggcgttcagcttgaa aagggagaaagtaccaatgaggttatttctaacgttttagatggaaaaacattccttttt acaggtaaattatcattgttcaccagggagcaggcagaagaaatggtagaaaaacatggc gggaaaaatatttcagccgtttcaaaaaatcttaatttcctcgttgtaggagaaaaagcc ggcagtaaattgaaaaaagcccaggatatcggaaccatagaagttttggacgaacagcaa tttcttgacctgatcgaaaagtga

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