Comamonas piscis: HS961_00490
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Entry
HS961_00490 CDS
T11249
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cpis Comamonas piscis
Pathway
cpis01501
beta-Lactam resistance
cpis01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cpis00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HS961_00490
01503 Cationic antimicrobial peptide (CAMP) resistance
HS961_00490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpis03036
]
HS961_00490
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpis02000
]
HS961_00490
01504 Antimicrobial resistance genes [BR:
cpis01504
]
HS961_00490
Chromosome and associated proteins [BR:
cpis03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HS961_00490
Transporters [BR:
cpis02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HS961_00490
Antimicrobial resistance genes [BR:
cpis01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HS961_00490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
YknX_C
CzcB_C
HH_YBHG
BSH_CusB
HH_EMRA
HH_CyaD
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
QMV71429
UniProt:
A0A7G5EBQ4
LinkDB
All DBs
Position
102264..103592
Genome browser
AA seq
442 aa
AA seq
DB search
MQQMYEANQSTGNLPASTSKRRKAGVLALTLVAALVLTACGNKKDEQAAPQGGAPKPPEV
SVLTVKLESIPLVADLPGRLEPVRVAQVGARVAGILQKRLFTEGSDVKAGQVLYHIDNAP
YRANLESAQATLAQAQATLAQAASTARRYKPLVEANAISKQEYDVAVANEKAALAQVAAG
KAGVTNANINLGYAAVTAPISGRIGRSLVTEGALVGQSGVTELAVIQQINPLYVNVTQSS
SEILRMREALKTGKLAKAGDNAAKVIVYTDDGKPYPHPGKLLFTDLTVDPATGQVSVRAE
LPNPENMLLPGMYVRVHIQEAQVDNAVLVPQQAVTRNEKGNTVMIVAADGSVSPRAVQIS
QSKGTNWVVSEGLKAGDQIMVDGFIKLGMGATHVTPVPWKNPSDKAAAPAAPAAGAAPQA
DAPAADKPAASADAAGNAASSK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaatgtatgaagcaaaccaatctaccgggaacctcccagcctctaccagcaag
cgccgcaaagccggcgtgctggccttgacgctggtcgccgccctggtcttgaccgcctgc
ggcaacaaaaaggacgagcaagcagccccacaaggcggcgcgcccaagcctcccgaagtc
agcgtcctgacggtgaagctggaaagcattcctctggtcgccgacctgcccggtcgcctg
gagcccgtgcgcgtggcccaagtaggtgcgcgcgtggccggtatcctgcaaaagcgcctg
ttcaccgaaggctcggatgtgaaggccggacaggtgctctaccacatcgataatgcgccc
taccgcgccaatctggaaagcgcacaggcgactctggcccaagcccaggccaccttggcc
caggctgcatccactgcccgccgctacaagccgctggtcgaggccaacgccatcagcaag
caggaatacgatgtcgccgtcgccaacgaaaaggcggcgctggcccaagtggctgctggc
aaggctggcgtgaccaatgccaacatcaacctcggctatgccgctgttaccgcgcccatc
tccggtcgcattggccgctccttggtgaccgaaggtgcgctggtcggccaaagtggtgtg
accgagctggccgtgatccagcagatcaacccgctgtatgtgaacgtgacgcagtcctcg
tccgagatcctgcgcatgcgcgaagccctcaagaccggcaagctggccaaggcgggcgat
aacgccgccaaggtcatcgtctacaccgatgacggcaagccttatccccatcccggcaag
ctgctgttcaccgatctgacggtagaccccgctaccggccaagtgagcgtgcgcgccgag
ctgcccaaccccgaaaacatgctgctgccgggcatgtatgtgcgcgtgcacatccaggaa
gcccaagtggacaacgccgtgctggtgccccagcaagcggtgacccgcaatgagaagggc
aataccgtgatgatcgtcgccgctgacggctcggtcagcccacgggccgtgcagatcagc
cagtccaagggtaccaactgggtggtgagcgaaggcctgaaggctggcgaccaaatcatg
gtcgatggcttcatcaagctgggcatgggcgcgacacacgtcacgccggtgccatggaag
aacccgagcgacaaggccgcagcgccggcggcgccagcagcaggggcagcgccccaggcg
gatgcgccggctgcggacaagcccgccgcttcggcagatgctgcaggcaacgccgcctcc
agcaaataa
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