Comamonas piscis: HS961_13650
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Entry
HS961_13650 CDS
T11249
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cpis Comamonas piscis
Pathway
cpis01501
beta-Lactam resistance
cpis01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cpis00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HS961_13650
01503 Cationic antimicrobial peptide (CAMP) resistance
HS961_13650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpis03036
]
HS961_13650
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpis02000
]
HS961_13650
01504 Antimicrobial resistance genes [BR:
cpis01504
]
HS961_13650
Chromosome and associated proteins [BR:
cpis03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HS961_13650
Transporters [BR:
cpis02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HS961_13650
Antimicrobial resistance genes [BR:
cpis01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HS961_13650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
Biotin_lipoyl_2
HlyD_3
Motif
Other DBs
NCBI-ProteinID:
QMV73791
UniProt:
A0A7G5EIG6
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All DBs
Position
3020950..3022257
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AA seq
435 aa
AA seq
DB search
MMPDVSNFSRQTLAPFQSLATVGKRHPSRMLGHAGRVAVLAAAVTALAACSDKAAPTAAA
PPAPEVGVITVQSSSQQLTAELPGRTSAFMMAEIRPQANGIVEKRLFTEGAAVKAGQALY
QLDARPAQAAVNSAEAAVAKANASAQTARSNAARNSELVKIDAISRQVFDDSQALVAQTA
SDVAVAKAALDNARINLQYTRISSPIAGKVSTSAVTPGALVTANQATALTTVVQLDPMYV
DFTQSSTEMLQLQRDLKAGRFQRLDGDQIPVRIRLDDGTEYNHEAKLKFSGVIVSATTGT
VTLRAQVPNPDGVLMPNMYVQALLPTAVAPDALLVPQQSVVRDLTGKPTVFVVTAEDKVQ
KRALQLDRAVGSQWLVGSGLKSGERVVVDGFQRVKDGDKVRITEVDLKAQAERVRSPGRV
PGQAAAPAPAPAAAQ
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggatgtttccaatttttcgcgccagaccctggcaccgtttcaatctttggca
accgtcggaaagcgtcatccctcccgcatgctcggccatgctggccgcgtagccgtattg
gcagcggcagtcactgcgcttgccgcgtgctccgacaaagcagcgcccaccgcagccgcg
cccccggcgccggaagtcggcgtcatcaccgtgcagtcctcatcgcagcaactgacggcc
gagctgcccggccgcaccagcgctttcatgatggcggagatccgcccccaggccaatggc
attgtggaaaagcgcttgttcactgaaggcgctgccgtcaaggccggccaggcgctctac
cagttggatgcccgccctgcgcaggcggcggtcaacagcgccgaagcggcagtcgccaag
gccaatgcatcggcccagaccgcgcgcagcaatgcggcgcgcaacagcgagctggtcaag
atcgatgccatcagccgccaggtgtttgacgacagccaggcgctggtagcccagacggcc
tccgatgtggccgtcgcaaaagccgccttggacaacgcccgcatcaacctgcagtacacc
cgcatcagctccccgattgccggcaaggtcagcacctcggccgtgacgcccggtgcgctg
gtcaccgccaaccaggccacggcgcttaccaccgtggtgcagctcgatccgatgtatgtg
gacttcacccagtccagcaccgagatgctgcagttgcagcgcgatttgaaggccgggcgc
tttcagcgcctcgatggtgaccagatcccggtgcgcatccgcctcgatgacggcaccgaa
tacaaccacgaagccaagctcaagttctctggcgtgatcgtcagtgctacgacgggtacc
gtcaccctgcgcgcccaggtccccaatccggatggcgtgctgatgcccaatatgtatgtg
caggcgctgctgccaacggccgtggcgccggatgccttgctggtgccccagcaatcggtg
gtgcgcgacctgacgggcaaacccaccgtgtttgtggtgacggccgaggacaaggtgcaa
aagcgcgcactgcagctggatcgcgccgtgggcagccagtggctggtgggcagtggcctc
aaatcgggagagcgcgtggtggtcgatggcttccagcgcgtgaaggatggtgacaaggtc
aggatcaccgaggtggatctgaaagcccaggccgagcgcgtgcgcagccctggacgcgtg
cccggccaggccgcagcgccggccccggccccggctgccgcccagtaa
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