Comamonas piscis: HS961_22725
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Entry
HS961_22725 CDS
T11249
Symbol
mdeB
Name
(GenBank) alpha-ketoglutarate dehydrogenase
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
cpis Comamonas piscis
Pathway
cpis00010
Glycolysis / Gluconeogenesis
cpis00020
Citrate cycle (TCA cycle)
cpis00620
Pyruvate metabolism
cpis00785
Lipoic acid metabolism
cpis01100
Metabolic pathways
cpis01110
Biosynthesis of secondary metabolites
cpis01120
Microbial metabolism in diverse environments
cpis01200
Carbon metabolism
cpis01210
2-Oxocarboxylic acid metabolism
Module
cpis_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
cpis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
HS961_22725 (mdeB)
00020 Citrate cycle (TCA cycle)
HS961_22725 (mdeB)
00620 Pyruvate metabolism
HS961_22725 (mdeB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HS961_22725 (mdeB)
Enzymes [BR:
cpis01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
HS961_22725 (mdeB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Transket_pyr
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
QMV75418
UniProt:
A0A7G5EN43
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All DBs
Position
5032677..5035358
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AA seq
893 aa
AA seq
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MIQALKPRTRQETAVRQPPTHLPKAPQADPAELAEWCDAFDGLLTAYGAAQGKEQAGALL
DALLAHARKRHVPWKPSGNTPYSNTISVDEQPPYPGDIELEKKLSAILRWNALAMVVRAN
AAHGELGGHIASYASAADLFETGFNHFFRADDGHHGGDLVYFQPHSSPGVYARAFLEGRL
GEDNLSHYRQELVAASQGIQGLSSYPHPYLMPEFWQFPTGSMGIGPINAIYQARFMRYLA
HRSLADTEGRKVWGFFGDGEMDEPESIAALTLAAREGLDNCIFVINCNLQRLDGPVRGNG
RIVDELEALFSGAGWNVVKCLWGSEWDALLARDHSHVLARTFAHTVDGEFQTLSANDGAF
NREHFFNQSPELAALVAHLSDSDIDRLRRGGHDPVKIHAAFASAAAHSGQPTVVLAKTMK
GYGMGSIGQGRMTSHQQKKLGAEDLLAFRDRFNLPLSDAQATSAAFLKPADGSAEMRYLL
ARRQALGGFLPARKGQAAPIAVPDLRATAGFALQADGKPMSTTMAFVRQLGNLLKDAELG
PRIVPIVADEARTFGMAGLFRQVGIYAPFGQLYQPEDNASVLLYREHSSGQILEEGISEA
GALSSWTAAATSYSTHGTAMLPFFIFYSMFGFQRVGDLIWAAADQRARGFLIGATSGRTT
LGGEGLQHQDGSSLLSASTVPNCKSYDPSFAGELAVIIDHGMQRMLQEQRDEFFYITVTN
ESVANPSLPPEAHEGVIRGMYLLQAGSANSARRVQLLGSGAIMGEVLKAAAILERDHGVA
ADIWSVTSYAELARDGEAQLERWRGGAPAQPSWFAQQLGASQGPIIAASDYVRALPELVR
AYLPTDANGLPRQHFYTLGTDGFGRSDSRAALRQHFAVDAAAIVQTYLRSQQA
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgatccaggcactcaaaccaagaaccagacaggagaccgccgtgcgccagccgcccacc
catttacccaaagctccccaagccgaccccgccgaactggccgagtggtgcgatgccttt
gatggcctgctgaccgcctacggggcggcccaaggcaaggagcaagccggtgccttgctg
gatgcgctgctggcgcatgcccgcaagcgccatgtgccctggaagccctcgggcaacacg
ccctacagcaataccatctcggtcgatgagcagccaccctacccgggcgatatcgaactg
gagaaaaagctctcggccatcctgcgctggaacgcgctggccatggtcgtgcgcgccaat
gccgcgcacggcgagctgggcggccacattgccagctatgcctcggcggccgatttgttc
gagaccggcttcaaccatttcttccgtgccgacgatggccaccacggtggcgatctggtg
tacttccagcctcattcgtcgcccggcgtttacgcacgcgcttttctggaagggcggctg
ggcgaagacaacctgagccactaccgccaggagctggtcgccgccagccaaggcatccag
ggcctcagctcttatccgcacccctatctgatgccggagttctggcagttccccaccggc
tccatgggcatcggcccgatcaatgccatctaccaggcgcgctttatgcgctacctggcg
cacaggagcctggccgacaccgaaggccgcaaggtctggggcttttttggcgatggcgag
atggacgagcccgaatccattgccgcgctgaccctggccgcgcgcgaggggctggacaac
tgcatcttcgtcatcaactgcaacctgcagcggctcgatggcccggtgcgcggcaatggc
cgtatcgtcgatgagctggaggcactgttcagcggcgcgggctggaacgtcgtcaaatgc
ctctggggatcggagtgggatgcgctgctggcgcgcgaccacagccatgtgctggcccgc
acctttgcgcacacggtggatggcgagttccagaccctgtcggccaacgatggcgccttc
aaccgcgagcattttttcaaccaaagcccggagctggccgcgctggtcgcccacctgtcg
gacagcgacatcgaccgcctgcgccggggtgggcatgaccccgtcaagatccatgccgcg
tttgccagtgccgccgcgcacagcggccaaccgaccgtggtgctggccaaaacgatgaag
ggctatggcatgggcagcatcggccagggccgcatgacctcgcaccagcaaaaaaagctg
ggcgccgaagacctgctggccttccgcgaccgcttcaacctgccgctgagcgatgcgcag
gccacctcggccgccttcctcaaaccggccgatggcagcgccgagatgcgctacctgctg
gcacgccgccaggcgctgggcggctttttgccagcgcgcaaaggccaggccgcccccatc
gccgtgcccgatctgcgggccaccgcaggctttgcgctgcaggccgatggcaagccgatg
agcaccacgatggcctttgtgcgccagctcggcaacctgctcaaagatgcagaactgggc
ccgcgcatcgtgcccatcgtggccgatgaggcgcgtacctttggcatggccgggctgttc
cgccaggtgggcatctacgcgccctttggccagctttaccagccggaggacaatgcctcg
gtgctgctgtaccgcgagcacagcagcggccagattctggaggaaggcatcagcgaagcc
ggtgcgctgtcgtcctggacggcggccgccaccagctacagcacgcatggcacggccatg
ctgccgtttttcatcttttacagcatgtttggctttcagcgcgtcggcgatttgatctgg
gccgctgccgatcagcgggcacgcggctttttgattggtgccacctccggccgcaccacc
ttgggcggcgaaggcctgcagcaccaagacggcagcagcctgctgagcgcctccaccgtg
cccaactgcaaaagctacgacccctcctttgccggcgagctggcggtcatcatcgaccat
ggcatgcagcgcatgctgcaagagcagcgggacgagttcttctacatcaccgtcaccaac
gaaagcgtggccaaccccagcctgccgccggaggcccatgaaggcgtcatccgtggcatg
tatttgctacaggccggcagcgcgaacagcgcgcgccgggtgcaattgctgggcagcggc
gccatcatgggcgaggtgctcaaggcggccgctattctggagcgcgaccacggcgtggcg
gccgatatctggagcgttaccagctatgccgagctggcccgcgatggtgaagcccagctg
gagcgctggcgcggtggcgcgcccgcacagcccagctggtttgcacagcaattgggcgcc
tcacaaggccccatcattgccgccagcgactatgtgcgcgcgctgcctgagctggtacgc
gcctacctgcccaccgatgccaacggcctgccgcgccagcatttctacaccctggggacg
gacggctttggccgcagcgattcgcgtgcagcgctgcgccagcattttgcggtcgatgcc
gccgccatcgtgcagacctatctgcgcagccaacaggcctga
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