Chiloscyllium plagiosum (whitespotted bambooshark): 122539987
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Entry
122539987 CDS
T08871
Name
(RefSeq) sodium channel protein type 4 subunit alpha-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122539987
Ion channels [BR:
cpla04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122539987
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
122539987
NCBI-ProteinID:
XP_043531181
LinkDB
All DBs
Position
33:complement(31585847..31771366)
Genome browser
AA seq
1963 aa
AA seq
DB search
MACFLTHPGPDSLRKFTRESLAEIEKRIAKEKAEKATKPPVEDEDDKPQPKSDLEAGKPL
PFIYGDLPSNLIAEPLEELDPFYSSKRTFIVINKGNAIFRFSTTSALYLLSPFHPLRRIA
IKILIHSLFSLFIMFTILANCVFMTMSDPAPWTKNVEYAFTGIYTFEAMIKIFARGFVID
DFTFLRDPWNWLDFSVITMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALI
QSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRHKCVIWPPSPELLYNYTFIESGSGMDN
DSLINTEFDLKAYLENEDNQYFLEGSPDALLCGNGTDAGRCPDGYMCFKTGRNPNYGYTS
YDTFSWAFLSLFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIFIGSFYLINLILAVVAM
AYAEQNEATRLEAEEKEKEFQEILESIKKHQKEQEALLHASKEHSGSHYSLSSDRMEKKN
GSDKHLPEDEHGAKEREGQRWSLTIPQTKPSVIITINGVVSQDGESGTAPNGRVVPSTIT
NKGDKNDDVAGMDIEDETSGSKRTSTFLEEPPPPMRAGSVASMYSSARLDELEEAQQRCP
PWWYKFANTYLIWDCCPLWIKFKEILKIIVMDPFVDLGITICIVLNTLFMAMEHYPMTET
FENMLSVGNLVFTGIFTAEMVLKLIALDPYYYFQVGWNIFDSIIVTLSLVELGLANVQGL
SVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKM
YKQCVCKISDECTLPRWHMNDFFHSFLIVFRILCGEWIETMWDCMEVAGQPMCLIVFMLV
MVIGNLVVLNLFLALLLSSFSADNLSAPDDDSEMNNLQIALNRITRAIDFVKGFMISIFR
RKKPDQEEKQLDDLSSSKTGALDFNHTDTETGKEEHSKLDGVTTMKGKYLRDKGDHMGLL
ANAHLTVRVPIAKGESDSEEEEQSSEADIEDTNMDLDVLPVKDEIPIPTKLNIDSSQCST
VDLKPEEEEVKEAAEENPENNDPEECLTEGCLRVCPCLDINIKSDRGKMWWNLRKTCFRI
VEHNWFETFIIFMILLSSGALAFEDIYIEDRKVIKTLLEYADQVFTYIFVVEMLLKWIAY
GFKTYFTNAWCWLDFMIVDVSLISLTAKILGYDELGPIKSLRTLRALRPLRALSRFEGMR
VVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFAKCINITSSELYPIEKINNMS
DCMDLITQHPGEARWLNLKVNFDNVGQGYLSLLQVATFKGWMAIMYAAVDSREMEQQPSY
EINKYMYLYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKK
LGSKKPQKPIPRPNNKFQGLFFDFVSKQAFDIFIMILICLNMVTMMIETDDQSEEKTNIL
YWINLVFIVVFTSECVLKIIALRYYYFTIGWNIFDFVVVILSIVGIMLADIIEKYFVSPT
LFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA
YVKKEVGIDDIFNFETFGNSMICLFQITTSAGWDGLLSPIMNSGLPDCDPNIANPGTDVK
GNCGNPPVGVVFFVSYIIISFLIVVNMYIAIILENFNVATEESAEPLCEDDFEMFYEVWE
KFDPEATQFVEYARLSDFVDTLQEPLRIPKPNKIKLITMDLPMVSGDKIHCLDILFALTK
EVLGESGEMDTLKESMEEKFMAANPSKVSYEPITTTLRRKQEEVCAIKIQRAFRRHLLKR
SVKHASYLYRRSATDAILHHEEAPEKEGLLAARLSQNYGIYQPGIVAPPPLALEEATTPI
EVLATPTEGTTSTDETTTPIEGATTSTEEAVTPIEGIPIDTAATPRETPATDAAAIHQKM
AVTPLEAAIRPLEAAITPLEASVSAAKPEDWIPETKDIRESIV
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atggcatgtttcctcactcatccggggcctgacagtttacgcaaattcaccagagaatct
ttggctgaaattgagaaaagaattgctaaggaaaaagctgaaaaggcaacaaaaccaccg
gtagaagatgaagatgacaaaccccaacccaaaagtgatctggaggctggcaaacccttg
ccatttatttatggagacctcccttcaaacttaattgcagaacctctggaagaattagac
ccattttatagctcaaagagaacattcattgtgataaacaaggggaatgccatttttcgg
ttcagtacaacgtctgcactgtacttgctgagtccctttcaccccctccggagaattgcc
atcaaaatccttatccattcattatttagtttattcatcatgtttacaattttagcaaac
tgtgtgttcatgacaatgagtgatccagcgccttggacaaaaaatgtagagtatgcattc
actgggatttatacctttgaagcaatgataaagatatttgctcgtggatttgtcattgat
gactttacatttcttcgtgatccatggaactggctggattttagtgtcatcacaatggca
tatgtcactgaatttgtggatttgggtaatgtctcagccctaagaacatttagagtgctc
cgggcactgaaaaccatcacagttattccagggctaaaaacgattgttggagctctgatc
cagtcagtaaagaaattatcagatgtgatgatcctgacagttttctgtttgagtgtattt
gcacttgttggcctacagctgtttatgggaaatttgagacacaaatgtgtgatatggcca
ccatctccagagctgttatataattacaccttcatagagagtgggtcaggaatggacaat
gatagcctgatcaatacagaattcgacttgaaagcctacctagaaaatgaagataaccaa
tactttctagaaggttctcctgatgctctcctgtgtgggaatggcacagatgctgggagg
tgtcctgatggttatatgtgttttaagactgggagaaatccaaactatggttacaccagc
tacgatacctttagttgggcatttctgtcactattccgtctcatgacacaagactactgg
gaaaatctcttccagttgactctccgtgctgctggaaaaacctatatgatcttctttgtg
gttatcattttcatcgggtctttttacctgatcaacttgattctggcagtggtggcaatg
gcttacgctgaacaaaatgaggccacacgcctggaagctgaggagaaggagaaagagttt
caagagattttggaaagcataaaaaaacaccaaaaagaacaagaagctctgttacatgcc
tccaaagaacactctggtagccattactcattgtcaagtgacagaatggagaagaaaaat
ggctctgacaaacatctccctgaggatgagcatggagctaaggaaagagagggtcaacga
tggtcgctaacaattccacaaaccaaaccatcggtcatcattacaattaatggagttgtt
tctcaagatggcgaaagtggcacagcacctaatggcagagttgtaccatcaactattaca
aacaaaggggacaagaatgatgacgtagctggtatggatattgaagatgagacttctgga
tctaaacgtacctccacatttctggaagaaccaccaccaccaatgagagctgggagtgta
gctagtatgtacagcagcgccaggctggatgagctggaagaagcacagcagcgttgtcct
ccctggtggtataaatttgccaatacatatctaatctgggattgctgcccgctgtggata
aaattcaaagaaatcttgaagattattgtgatggacccatttgtggatctgggaatcact
atttgcattgtgctgaacactctctttatggcaatggagcactatcccatgactgaaact
tttgaaaacatgctctctgttggaaatttggtattcacagggattttcacagctgaaatg
gtgttaaaattgatagctctcgatccttattactactttcaagttggttggaatatattt
gacagcatcattgtgactctcagcttggtagagctaggactggctaatgtgcaaggatta
tcggtgcttcgttcattcagattgctgagagttttcaaacttgcaaagtcttggcccact
ttgaacatgctgatcaagatcattgggaactcggtgggtgcactggggaatctgacactc
gtccttgccattattgttttcatctttgctgtggttggaatgcagctcttcggcaagatg
tacaagcaatgtgtttgtaagatttcagatgaatgcaccctcccacggtggcacatgaat
gacttctttcactcgtttctgattgtgtttcgcattctttgcggagaatggattgagacg
atgtgggattgcatggaggtagcaggacaacccatgtgtctcatcgttttcatgttggtc
atggtgattggtaacctggtggtgcttaacctcttcctggccttgctgttgagctccttc
agtgcagataacctctcagcacctgatgacgactcagaaatgaacaatctgcaaattgca
ctcaacagaatcaccagggcgatagattttgtaaaaggctttatgatcagtatctttcga
agaaagaagcctgaccaggaagagaagcaattagatgacttgtcttcttcaaaaactggg
gctcttgactttaaccacaccgacacagagactggaaaggaggagcattctaaacttgat
ggggttaccacaatgaaagggaaatatcttcgagataaaggtgaccacatgggcctcttg
gccaatgctcacttgactgttcgtgttcccattgccaaaggtgaatcagattctgaagag
gaggaacaaagctctgaagcagacattgaggataccaacatggatttggatgtattgcca
gtgaaagatgaaattcccatacctactaaattgaatatagactcgtcccagtgcagtacc
gtggacctgaaacctgaggaagaagaggtaaaggaggctgcagaagaaaatcctgagaat
aatgacccagaagaatgcttgacagaaggctgtttgagagtctgtccttgtcttgacatc
aatataaagagtgatcgaggcaagatgtggtggaatctgaggaaaacctgcttcaggata
gtggaacacaactggtttgaaacattcatcatctttatgatcctgctgagcagtggtgcc
ctggcatttgaagatatttacattgaggacaggaaagtgattaagaccctgcttgaatat
gctgaccaagtatttacatatatctttgtggtggaaatgctgctcaaatggatagcatat
ggattcaaaacatacttcaccaatgcatggtgctggctagacttcatgattgttgatgta
tctttgatcagcctgactgcaaaaatccttggctatgatgagttgggacccattaaatcc
ctccggaccctgagggccctgagacctctgcgagctttgtcccggttcgagggaatgagg
gtggttgtgaatgctctggtcggtgccatcccatccatcatgaatgtgctcttggtttgt
ctcatcttctggctgattttcagtataatgggagtcaacctgtttgctggaaagtttgcc
aaatgcataaacatcacatcctcagagttatatcccattgagaaaataaacaacatgagt
gattgcatggatttaatcacacaacatcctggtgaagcacgatggctcaacttgaaggtc
aactttgacaatgttggtcaaggatatctatccttactccaagtggcaacctttaaaggc
tggatggctataatgtatgcagctgttgattcccgtgagatggaacagcagccctcatat
gaaattaataaatatatgtacttgtacttcgtcattttcatcatcttcggagcattcttc
accctcaatctctttattggtgtaattattgacaatttcaaccaacagaagaaaaagttt
ggaggaaaagatatctttatgacagaagagcagaagaaatattacaatgctatgaagaag
cttggctcgaagaaaccacaaaaacccatcccaagaccaaataataaatttcaaggattg
ttctttgatttcgtcagcaagcaagcctttgatatcttcatcatgattctcatctgcctc
aacatggtaactatgatgatagaaacagatgaccaaagtgaagaaaaaactaatattctt
tactggatcaacttggtgtttattgttgtgtttaccagtgaatgtgtgctcaagatcatc
gctttaagatactattacttcaccattggctggaacatttttgactttgttgtggtgatt
ctttcaattgtgggtattatgttggcagatataatagagaagtacttcgtatcacctact
ctgttcagagttattagattggccaggattggtcgggtcctgcgacttatcagaggagct
aaaggaattcgaactctgctattcgccttgatgatgtcacttcctgctttgttcaacatt
ggccttttgctgtttctggtgatgttcatctattccatttttggaatgtccaattttgcg
tacgtgaaaaaggaagtaggcatcgatgacatattcaattttgaaacctttggcaacagc
atgatctgcctgtttcagatcaccacctcggctgggtgggatggtctgctctcgcccatt
atgaacagcggactccctgattgtgatcctaatatagctaatccagggaccgatgttaaa
gggaattgtggaaatccaccagtcggggtcgtcttttttgtcagctacatcatcatttcc
tttctgattgtggtgaacatgtacatcgccatcatcttggagaacttcaacgtggccact
gaggagagtgcggaaccactttgcgaggatgactttgaaatgttctatgaagtctgggaa
aagtttgacccggaggccacgcaatttgtcgagtacgccagattgtcggactttgtcgac
acgctgcaagagccattgcgaattcccaaaccgaataagatcaagctgattaccatggac
ttaccgatggtgtcaggtgacaagatccactgtctggatatcctttttgcattgaccaag
gaggtgctgggtgaatctggagagatggacactctgaaggagtctatggaggagaagttc
atggctgccaatccttccaaggtctcgtatgaacccataaccaccacgcttcggcggaag
caagaggaggtttgtgcaatcaagattcagcgagcgttccggcgtcacttgctgaaacgc
tctgtcaagcatgcatcctatttgtaccgccggagtgcgactgatgcaattctccaccat
gaagaggctccagagaaagaagggctgcttgctgctcgactgagtcaaaactacggtata
taccagcctggcatagtagctccaccacctttagctctggaagaagcaacaactcctata
gaagtattagcaactcccacagaagggacaacttctacagatgaaacaacaactcctatt
gaaggagcaacaacctctactgaagaagcagtgacacctatagaaggaattcccattgac
acagcagcaactcctcgagaaacaccagcaacagatgcagcagcgattcaccagaaaatg
gcagttaccccactggaagcagccatacgccctctagaagctgcaattacccctctagaa
gcttcagtaagtgcagccaaaccagaagactggattcctgaaacaaaggacattagagaa
tcaattgtataa
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