Chiloscyllium plagiosum (whitespotted bambooshark): 122540519
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Entry
122540519 CDS
T08871
Name
(RefSeq) cystathionine beta-synthase-like isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00260
Glycine, serine and threonine metabolism
cpla00270
Cysteine and methionine metabolism
cpla00670
One carbon pool by folate
cpla01100
Metabolic pathways
cpla01230
Biosynthesis of amino acids
Module
cpla_M00035
Methionine degradation
cpla_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
122540519
00270 Cysteine and methionine metabolism
122540519
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
122540519
Enzymes [BR:
cpla01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
122540519
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GFIT
Motif
Pfam:
PALP
CBS
SDH_alpha
malic
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
122540519
NCBI-ProteinID:
XP_043532318
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Position
35:23588835..23626561
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AA seq
531 aa
AA seq
DB search
MMTSEQSNKMKENQIQEPQQPRMPDLPSRCTWSLGMAPSKSPHTQDQLKDSSKILPNVLY
KIGNTPLIRINNIAKEYGIKCELLAKCEFFSAGGSIKDRIALRMIEDAEKQGILRSGDVI
IEPTSGNTGIGLGLVAAVKGYRCIIVMPEKMSLEKVNVLKALGVEVVRTPNTANLNSPDS
HIGMAWKLKSEIPNSHVFDQYQNASNPLAHYDITAEEILDQCEGQVDVVVMGAGTGGTIT
GIARKFKEKCPNCEIIAVDPEGSTMAEPEELNFPDQISYEVEGIGHRFIPTVLDRKVIDK
WLKTNDEESFAMARMLIKKEGLLCGGSSGSAMCAALRVAKDLKEGQRCVVILPDSVRNYM
SKFLSDDWMEEKGFLHADSDQKSWWNVPINQMKLPSTLTVLPTISCQDIIQILKENSMNT
AVVIDSSGTVLGLVTLGNIKSLVYEGKLQLTDLVSKVIYQQFKKVKLSDTIGKILQILTL
NHFALIVHEQIHSNGSGECGKREMVHGVVTFNDLITFIADKKKMMGTAEKY
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgatgacctctgaacagagcaacaaaatgaaagagaatcaaatacaggaacctcagcag
cctagaatgccagaccttccatcacgctgcacctggagtctgggaatggcgccatccaaa
tctccacacactcaagatcagctaaaggattcaagcaagatcttgcctaatgtcctctat
aaaattggtaacactcccctcatccgaattaataatattgcaaaagaatatggaatcaaa
tgtgagctattggcaaaatgtgagttcttcagtgctggtggaagtattaaggaccgcatt
gctttacgaatgattgaagatgctgagaaacaagggattctgagatcaggtgatgtcatc
attgaaccaacctctggtaacacgggtattggtttaggcttggtggctgctgtgaaagga
tatcgctgcatcattgtcatgccagagaagatgagcttagagaaggtcaatgtgttgaaa
gccttgggggttgaagtggtgaggacaccaaacactgcaaatctcaatagccctgactct
catattggaatggcttggaaactgaagagcgagattccaaactctcatgtgtttgatcag
tatcaaaatgctagcaatccattagcacattatgacatcactgcagaagaaattctggat
caatgtgaaggacaagttgatgttgtggtgatgggtgctggaactggtggtaccatcact
ggcatagcaagaaaattcaaggaaaaatgtcccaactgtgagatcattgctgttgaccct
gaaggttcaactatggctgaaccagaagaactcaacttcccagaccagatttcatatgaa
gtggaaggaattggccatagatttataccgaccgtactggacagaaaagtgattgacaaa
tggctgaagactaatgatgaggaaagttttgcaatggctcggatgttgatcaaaaaggaa
ggattgctgtgtggtggaagctctggtagtgccatgtgtgcagctttaagagtggcaaaa
gatctgaaagaaggacagcgctgtgtcgtgattctcccagattctgttcgaaattacatg
tcaaaatttcttagtgatgattggatggaagagaaagggttcctgcatgcagacagtgac
caaaaaagctggtggaatgtaccaatcaatcagatgaagcttccctcaactctgactgtc
cttcccacaatcagttgccaggatattatccagattctcaaagagaatagcatgaacact
gcagtggtcattgactccagtgggacagttctgggtttagtcactcttggaaatattaag
tctttagtttatgaaggaaaactgcagctcactgatctggtgtctaaagtcatttaccag
cagttcaaaaaggtgaaattaagtgacactattggaaaaatcttgcagattttgacactg
aatcattttgccttaattgttcatgaacaaattcacagtaatggcagtggcgaatgtgga
aaaagagaaatggtgcatggcgtggtaacatttaatgatctgataacctttatagcagac
aagaagaaaatgatgggtacagcagaaaaatattaa
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