KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122541173
Entry
122541173         CDS       T08871                                 
Name
(RefSeq) TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04010  MAPK signaling pathway
cpla04137  Mitophagy - animal
cpla04141  Protein processing in endoplasmic reticulum
cpla04210  Apoptosis
cpla04217  Necroptosis
cpla04621  NOD-like receptor signaling pathway
cpla04622  RIG-I-like receptor signaling pathway
cpla04920  Adipocytokine signaling pathway
cpla05132  Salmonella infection
cpla05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122541173
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    122541173
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    122541173
  09143 Cell growth and death
   04210 Apoptosis
    122541173
   04217 Necroptosis
    122541173
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    122541173
   04622 RIG-I-like receptor signaling pathway
    122541173
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    122541173
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    122541173
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    122541173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpla03019]
    122541173
   04121 Ubiquitin system [BR:cpla04121]
    122541173
Enzymes [BR:cpla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122541173
Messenger RNA biogenesis [BR:cpla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     122541173
Ubiquitin system [BR:cpla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    122541173
SSDB
Motif
Pfam: TRAF-mep_MATH zf-TRAF TRAF3_RING zf-C3HC4 zf-C3HC4_4 zf-RING_UBOX zf-RING_5 zf-RING_10 zf-C3HC4_2 zf-RING_2 TRAF2_zf zf-TRAF_2
Other DBs
NCBI-GeneID: 122541173
NCBI-ProteinID: XP_043533728
LinkDB
Position
37:complement(26024389..26037381)
AA seq 467 aa
MVALVSGITPVDSAGRSCLLCSVCRFLLIKPKQTECGHRYCTACLENLFKTDNEADCHVC
QQKVFRSKVYHDRAAENDAYATKIQCTAYRDGCDWTGTLRNYLRTHRAQCDFHVVPCSNV
TFGCETVGPRKKMLAHETQECEWRMELCPRCETFCTHKLLEDHITMCTKWKETCPVCGKT
DLTKAELEEHCDPDHGTCPDAQVSCPFKDIGCLENPRRRDVDDHLRAGQPEHLLLMLKRR
GGPPLEGGASAPASGELSALGRKADALSRELERYAHLVEVLQRRCLHSEQLVAGLQRRVR
ALEGAREQPASTNGVLLWKIRDFASRLAAARAERVTSFYSPAFQTHPFGYRLCCRLYPNG
DGNGRGSHLSLFLAVVRGDYDDVLPWPFRQRVTFLLLDQAQQKHHLRESFAPDALSGSFH
KPQSRMNVASGCPTFARHEMLHRDRSPYLRDDTLYIKVVVDTAGLVP
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggtagccctggtctccgggatcaccccggtcgattcggccggcagatcctgtctcctg
tgctcggtctgccgctttctgctcatcaaacccaaacagaccgagtgtggacaccgatat
tgcacagcctgcctggagaacttgttcaaaacagataatgaggcagattgccatgtttgt
cagcagaaggtcttccgttctaaggtctatcacgacagagccgccgaaaatgatgcttat
gccacaaagattcaatgtacagcttaccgggatggttgcgactggacaggaacactgcga
aactacctgcgcacacaccgagcccagtgcgatttccacgtagtcccgtgctctaatgtc
acgttcggctgtgagaccgtgggccccaggaagaagatgctagcacacgaaacgcaggag
tgcgagtggaggatggaactgtgtccccggtgtgagaccttctgcactcacaagctgctg
gaggatcacatcacgatgtgtaccaaatggaaggagacttgtccagtctgtggcaagaca
gatttaacaaaggctgagttggaggaacactgtgaccctgatcatggcacctgtcctgat
gcccaggtctcctgcccctttaaggacattggctgcctggagaatcctcggaggcgggac
gtggacgaccacctgcgggccgggcagccggagcacctcctgctgatgctgaagaggaga
ggcgggccgccgctcgaggggggcgcatcggctccagcctcgggggagctgagcgccctg
gggcggaaggcggacgccctgagccgcgagctggagaggtacgcccacctggtggaggtg
ctgcagcggcgctgcctgcattcggagcagctggtggcgggcctgcagcgccgggtgcgg
gcgctggagggagcccgcgagcagcccgccagcaccaatggagtgctcctctggaagatc
cgggactttgcctcccgcctggcggcggccagggccgagcgggtgacgtcattctactct
cccgccttccaaacgcaccctttcggctaccgcctgtgctgccgcctctacccgaacggc
gatggcaacggccggggcagccacctctccctcttcctggccgtggtgcgcggcgactac
gacgacgtgctgccctggccgttccgccagcgggtcacctttctgctgctggaccaggcg
cagcagaagcaccacctgcgggagtccttcgcgccggacgcgctgagcggctccttccac
aagccgcagagccgcatgaacgtggcgagcggctgccccaccttcgcccgccacgagatg
ctgcaccgggatcgcagcccttacctgcgggacgacaccctctacatcaaggtggtggtg
gacacggcggggctggtgccctga

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