Chiloscyllium plagiosum (whitespotted bambooshark): 122541173
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Entry
122541173 CDS
T08871
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04010
MAPK signaling pathway
cpla04137
Mitophagy - animal
cpla04141
Protein processing in endoplasmic reticulum
cpla04210
Apoptosis
cpla04217
Necroptosis
cpla04621
NOD-like receptor signaling pathway
cpla04622
RIG-I-like receptor signaling pathway
cpla04920
Adipocytokine signaling pathway
cpla05132
Salmonella infection
cpla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122541173
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122541173
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122541173
09143 Cell growth and death
04210 Apoptosis
122541173
04217 Necroptosis
122541173
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122541173
04622 RIG-I-like receptor signaling pathway
122541173
09152 Endocrine system
04920 Adipocytokine signaling pathway
122541173
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122541173
09171 Infectious disease: bacterial
05132 Salmonella infection
122541173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122541173
04121 Ubiquitin system [BR:
cpla04121
]
122541173
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122541173
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122541173
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
122541173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-RING_5
zf-RING_10
zf-C3HC4_2
zf-RING_2
TRAF2_zf
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
122541173
NCBI-ProteinID:
XP_043533728
LinkDB
All DBs
Position
37:complement(26024389..26037381)
Genome browser
AA seq
467 aa
AA seq
DB search
MVALVSGITPVDSAGRSCLLCSVCRFLLIKPKQTECGHRYCTACLENLFKTDNEADCHVC
QQKVFRSKVYHDRAAENDAYATKIQCTAYRDGCDWTGTLRNYLRTHRAQCDFHVVPCSNV
TFGCETVGPRKKMLAHETQECEWRMELCPRCETFCTHKLLEDHITMCTKWKETCPVCGKT
DLTKAELEEHCDPDHGTCPDAQVSCPFKDIGCLENPRRRDVDDHLRAGQPEHLLLMLKRR
GGPPLEGGASAPASGELSALGRKADALSRELERYAHLVEVLQRRCLHSEQLVAGLQRRVR
ALEGAREQPASTNGVLLWKIRDFASRLAAARAERVTSFYSPAFQTHPFGYRLCCRLYPNG
DGNGRGSHLSLFLAVVRGDYDDVLPWPFRQRVTFLLLDQAQQKHHLRESFAPDALSGSFH
KPQSRMNVASGCPTFARHEMLHRDRSPYLRDDTLYIKVVVDTAGLVP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggtagccctggtctccgggatcaccccggtcgattcggccggcagatcctgtctcctg
tgctcggtctgccgctttctgctcatcaaacccaaacagaccgagtgtggacaccgatat
tgcacagcctgcctggagaacttgttcaaaacagataatgaggcagattgccatgtttgt
cagcagaaggtcttccgttctaaggtctatcacgacagagccgccgaaaatgatgcttat
gccacaaagattcaatgtacagcttaccgggatggttgcgactggacaggaacactgcga
aactacctgcgcacacaccgagcccagtgcgatttccacgtagtcccgtgctctaatgtc
acgttcggctgtgagaccgtgggccccaggaagaagatgctagcacacgaaacgcaggag
tgcgagtggaggatggaactgtgtccccggtgtgagaccttctgcactcacaagctgctg
gaggatcacatcacgatgtgtaccaaatggaaggagacttgtccagtctgtggcaagaca
gatttaacaaaggctgagttggaggaacactgtgaccctgatcatggcacctgtcctgat
gcccaggtctcctgcccctttaaggacattggctgcctggagaatcctcggaggcgggac
gtggacgaccacctgcgggccgggcagccggagcacctcctgctgatgctgaagaggaga
ggcgggccgccgctcgaggggggcgcatcggctccagcctcgggggagctgagcgccctg
gggcggaaggcggacgccctgagccgcgagctggagaggtacgcccacctggtggaggtg
ctgcagcggcgctgcctgcattcggagcagctggtggcgggcctgcagcgccgggtgcgg
gcgctggagggagcccgcgagcagcccgccagcaccaatggagtgctcctctggaagatc
cgggactttgcctcccgcctggcggcggccagggccgagcgggtgacgtcattctactct
cccgccttccaaacgcaccctttcggctaccgcctgtgctgccgcctctacccgaacggc
gatggcaacggccggggcagccacctctccctcttcctggccgtggtgcgcggcgactac
gacgacgtgctgccctggccgttccgccagcgggtcacctttctgctgctggaccaggcg
cagcagaagcaccacctgcgggagtccttcgcgccggacgcgctgagcggctccttccac
aagccgcagagccgcatgaacgtggcgagcggctgccccaccttcgcccgccacgagatg
ctgcaccgggatcgcagcccttacctgcgggacgacaccctctacatcaaggtggtggtg
gacacggcggggctggtgccctga
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