Chiloscyllium plagiosum (whitespotted bambooshark): 122541275
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Entry
122541275 CDS
T08871
Name
(RefSeq) HLA class II histocompatibility antigen, DQ beta 1 chain-like
KO
K06752
MHC class II antigen
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04145
Phagosome
cpla04514
Cell adhesion molecules
cpla04672
Intestinal immune network for IgA production
cpla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122541275
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122541275
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
122541275
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122541275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122541275
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122541275
Exosomal proteins of epithelial cells
122541275
Exosomal proteins of breast milk
122541275
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Gene cluster
GFIT
Motif
Pfam:
C1-set
Ig_3
Ig_2
C2-set_2
I-set
ig
MHC_II_beta
Motif
Other DBs
NCBI-GeneID:
122541275
NCBI-ProteinID:
XP_043533830
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All DBs
Position
37:1007067..1024730
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AA seq
271 aa
AA seq
DB search
MDLYRVCDPRSLWIRIPLLIGTFILLNGGRDSGAGAHSTNFIDGCRFNISGAWTFTQQYV
YDKELIAYYDFDQKIYIAVKDWMKGNVARWNKEEAAGTYQEGIRVCENNVPIYSKVVSRK
VEPTVTIRPKASQHSTQSALLSCHVTGFYPPEIDVTWLKNGAPIPDGVINTVLLSDGDWT
YQVEDLLQYQPVSGDKYTCRVEHSSLRGPRSVDWEVQNVSLSERHKIIVGALFFGIGLII
LLAGVIMRLKSAKAILDSSNHGPRLMGPAVS
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggatctgtacagagtgtgtgacccccgctccctgtggatccggatccccctcctcatc
gggacatttatcctcctcaatggagggagagacagcggagctggggctcactccactaat
ttcattgacggatgtaggtttaatatctctggggcctggacctttactcagcagtacgtt
tatgataaagaactgatcgcgtactatgactttgatcagaagatatacatcgctgtgaaa
gactggatgaaggggaatgtggcccgatggaataaagaggaagcggctggaacataccag
gaagggatccgagtgtgtgagaacaatgttccgatctacagcaaagtggtgtcccggaaa
gttgaaccaacagtcactatccgacctaaagcctctcaacattccacacagtcagctttg
ctctcgtgtcatgtcactggattttaccctcctgagattgatgtcacgtggctgaaaaat
ggagcaccaattcctgatggtgtcatcaacactgtcctgttatcagatggtgactggacc
tatcaggtggaggatctcctccagtaccagccagtgtctggggataaatacacctgtcgt
gtggaacacagcagcctgagggggcccaggagtgtggattgggaagtacagaacgtctct
ctatcagagagacacaagatcattgttggagccctgttctttgggattggactgatcatc
ttactagctggagtgataatgagattaaagagtgctaaagctatcctggactccagcaat
catggtccacgtctgatgggtccagctgtcagctaa
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