Chiloscyllium plagiosum (whitespotted bambooshark): 122542695
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Entry
122542695 CDS
T08871
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04620
Toll-like receptor signaling pathway
cpla04621
NOD-like receptor signaling pathway
cpla04622
RIG-I-like receptor signaling pathway
cpla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
122542695
04621 NOD-like receptor signaling pathway
122542695
04622 RIG-I-like receptor signaling pathway
122542695
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122542695
SSDB
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GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF3_RING
zf-TRAF
zf-C3HC4
zf-C3HC4_2
zf-RING_5
CEP104_ZnF
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
DM
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
122542695
NCBI-ProteinID:
XP_043536609
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All DBs
Position
41
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AA seq
525 aa
AA seq
DB search
MAAGSGSERSKPCLYRPVKEVPTSASCRPHQIPGGELPDGGYSEEFVQAVDNKYRCEHCQ
RVLRNAKQTECGHRFCESCLNALLRVPGQVCPADQQPLDNTEVFNDNCCRKEILKLLIHC
RNRKAGCQQQTALGSLEAHLNSCPFQTIQCSRCPEMVQRQELSDHLMFKCKHKAVQCRHC
QKEMTVAELKAHEESECLSSLVASPKPCGARGHRTELKGPMSEYLKAEGCCKFSSYGCTF
KGTSQRTKEHETQSVEQHLLLVLLRNKALEEKVSELESEIIEKHSVLQKLAGQIPKMEKE
MSLTNQSVNRSEIKLNQSQNIRIIMNYPWLLISESVEQQVAQHDNLLSVHEVRLAEIDLR
FQLLETASYNGRLIWKIRDYARRKQEAVSGKTLSLYSQPFYSSSFGYKMCARVYLNGDGM
GKGTHLSLFFVVMRGEYDPLLPWPFKQKVTLTLLDQGLAKAHVSDTFKPDPNSSSFRRPQ
SEMNVASGCPLFVTQTVLENEMHHYIKDDTIFIKVTVDVSDFLEL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggaagtggttcagagaggtcaaagccgtgcttgtaccgacctgtgaaggag
gttcccaccagcgcctcctgtaggccccaccagatcccgggaggcgagctgcccgatggg
ggctactctgaagagtttgttcaggccgtcgacaacaagtacagatgtgagcattgccag
cgggtgctacgcaatgccaagcagaccgagtgtgggcaccgattctgtgaaagctgcctc
aacgcccttctcagggttcctggtcaggtttgcccagctgatcaacagcctctggacaac
acggaggtgttcaacgataattgctgccggaaagaaatcttaaagttgctgattcactgc
aggaacaggaaggcaggttgccaacagcaaacggccctgggatctttggaggctcatttg
aacagctgtccctttcagacaatccagtgctcacgttgtcctgagatggtgcaacgacaa
gagctgagtgatcacctaatgttcaagtgcaaacataaagcagtgcagtgtagacactgt
cagaaggagatgacagtagccgaactaaaggcacatgaagagagtgagtgcctatcttct
ctggtcgcttctccaaaaccctgtggggcgcgtggtcacaggactgagctcaaaggtccc
atgtcagagtatctcaaggctgaggggtgttgcaaatttagcagctacgggtgtacgttt
aagggaacaagtcaaaggaccaaagaacacgaaacacagtcggtggagcagcacttgctg
ctggtgctgctaagaaacaaggccctggaggagaaggtctccgaactcgagagcgagatc
atagagaaacacagtgtcttacaaaagctggccggtcagattccgaaaatggagaaggaa
atgtctttgacgaaccaatcggtgaacagaagtgagatcaaattgaaccagtcacagaat
attaggataataatgaactatccctggttattgatttcagagtcagtcgaacagcaagtt
gcccaacacgataacctgttgagtgtccacgaggtgcgacttgctgagatcgatctccgc
tttcagctgctggagacagcgagttataacgggcgactgatctggaaaatccgtgactac
gcgcggcggaagcaggaggcggtatctgggaagaccctgtccctgtacagccagcccttc
tacagcagctccttcggctacaagatgtgtgccagggtctacctgaacggcgatggaatg
ggcaagggcacccacctgtcgctgttcttcgtggtgatgcgcggtgagtacgaccccctg
ctgccctggccgttcaagcagaaggtgaccctcactctcctggaccagggcctggctaag
gcccacgtgtcggataccttcaaacccgaccccaacagctccagcttccgcaggcctcag
agcgagatgaacgtggcgtccggctgcccgctgtttgtgactcagaccgtgctcgagaac
gagatgcaccactacatcaaggacgacaccatcttcatcaaggtgactgtggacgtgtcg
gatttcctggagctctga
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