KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122546497
Entry
122546497         CDS       T08871                                 
Name
(RefSeq) SLA class II histocompatibility antigen, DQ haplotype D beta chain-like
  KO
K06752  MHC class II antigen
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04145  Phagosome
cpla04514  Cell adhesion molecules
cpla04672  Intestinal immune network for IgA production
cpla05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    122546497
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    122546497
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    122546497
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    122546497
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpla04147]
    122546497
Exosome [BR:cpla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122546497
  Exosomal proteins of epithelial cells
   122546497
  Exosomal proteins of breast milk
   122546497
SSDB
Motif
Pfam: C1-set Ig_3 I-set Ig_2 C2-set_2 Cna_B DUF202 MHC_II_beta Neurensin
Other DBs
NCBI-GeneID: 122546497
NCBI-ProteinID: XP_043541129
LinkDB
Position
Unknown
AA seq 276 aa
MDLYRVSDPRSLWMWIRIPIPLLVGTFILLNGERDSGADAHSYSHVQGCEFNSSGSWTFI
FQYIYDQQLIVYFDFNHKKYIAVKDWAKSNADRWTKESGEALYQQAIGFCQNNIGIMESE
VLSRKVEPTVTIRPKASPHSAQSALLSCHVTGFYPPEIDVMWLKNGAPIPDGVINTVLLS
DGDWTYQVEDLLQYQPVSGDKYTCHVEHSSLRWPRSVDWEVRSIPESAHPKIAVGALFFV
IGLIILLAGVIMRLKNAKAILDSSNHGPRLMSTAAS
NT seq 831 nt   +upstreamnt  +downstreamnt
atggatctgtacagagtgtctgacccccgctccctgtggatgtggatccggatcccgatc
cccctcctcgtcgggacatttatcctcctcaatggagagagagacagcggagcagacgct
cacagctatagccacgttcaaggctgtgagtttaacagctccgggagctggaccttcatc
ttccagtacatctatgaccaacagctgatcgtgtatttcgactttaaccacaagaagtac
atcgcggtgaaggactgggcgaagtctaatgcggacagatggactaaagagagcggggag
gccctgtaccaacaagcgatcggtttctgtcagaataacatcggtatcatggagagtgag
gtgctgtcccggaaagttgaaccaacagtcactatccgacctaaagcctctccgcattct
gcacaatcggctttgctctcatgtcatgtcactggattttaccctcctgagattgatgtc
atgtggctgaaaaatggggcaccaattcctgatggtgtcatcaacactgtcctgttatca
gatggtgactggacctatcaggtggaggatctcctccagtaccagccagtgtctggggat
aaatacacctgtcatgtggaacacagcagcctgaggtggcccagaagtgtggattgggaa
gtccggagtattcctgaatcggcacatcccaagattgctgtcggagccctgttctttgtg
attggactgatcatcttgctggctggagtgataatgaggctgaagaatgctaaagctatt
ctggactccagcaatcacggtccacgtttgatgagtacagctgcaagttaa

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