KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122547087
Entry
122547087         CDS       T08871                                 
Name
(RefSeq) tumor necrosis factor-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04010  MAPK signaling pathway
cpla04060  Cytokine-cytokine receptor interaction
cpla04150  mTOR signaling pathway
cpla04210  Apoptosis
cpla04217  Necroptosis
cpla04350  TGF-beta signaling pathway
cpla04620  Toll-like receptor signaling pathway
cpla04621  NOD-like receptor signaling pathway
cpla04622  RIG-I-like receptor signaling pathway
cpla04625  C-type lectin receptor signaling pathway
cpla04920  Adipocytokine signaling pathway
cpla05132  Salmonella infection
cpla05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    122547087
   04350 TGF-beta signaling pathway
    122547087
   04150 mTOR signaling pathway
    122547087
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    122547087
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    122547087
   04217 Necroptosis
    122547087
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    122547087
   04621 NOD-like receptor signaling pathway
    122547087
   04622 RIG-I-like receptor signaling pathway
    122547087
   04625 C-type lectin receptor signaling pathway
    122547087
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    122547087
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    122547087
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    122547087
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cpla04052]
    122547087
   00536 Glycosaminoglycan binding proteins [BR:cpla00536]
    122547087
Cytokines and neuropeptides [BR:cpla04052]
 Cytokines
  Tumor necrosis fators
   122547087
Glycosaminoglycan binding proteins [BR:cpla00536]
 Heparan sulfate / Heparin
  Cytokines
   122547087
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 122547087
NCBI-ProteinID: XP_043541601
LinkDB
Position
Unknown
AA seq 235 aa
MGSERMLVELEHGREREAGSPQGSARCLTVLSTFTLLALVTGCGYLLFTQTHSPAPSQAN
WVRQAGSEFLSFPFPGLPRLMKQVGSDPRPRIAAHLTANPIPQVSDVLTWQEQAGIAFSY
GVEFSNNSLLIKQAGFYFIYTQVVFHYSQCEDSTIFLSHDMHKLSLAYPEETILLRATKS
VCHHGSHSDPWFKTSYQGAIFEFEEGDRIFSRVSENVVRYLDKTEGKTFFGIFAL
NT seq 708 nt   +upstreamnt  +downstreamnt
atgggcagcgagaggatgttggtggagctggaacatggcagggagcgtgaggcagggagc
cctcaaggaagtgcacgctgtctgactgtgctcagcaccttcacgctgctcgccctggtg
actggctgcgggtatctcctgttcacccagacccactctccagctcccagccaggccaac
tgggtaaggcaagctgggtctgagtttctatcttttccatttccaggtttgccccgactc
atgaagcaggtggggagtgacccccggccgagaatcgcagctcacctgacagccaatccc
atcccccaggtttcggacgtgctgacttggcaggagcaggcaggcatagcattctcctat
ggcgtggagttctcaaacaacagcctcctgatcaagcaggccggtttttacttcatctac
acccaggtggtcttccactacagccagtgcgaggacagcaccatcttcctgagccacgat
atgcacaagctctccttggcctacccagaggagaccatcctgctcagggccactaagtca
gtctgccatcacggcagccactctgacccctggttcaagacctcctaccagggcgccatc
ttcgagtttgaggagggcgaccggatcttctcccgggtctccgagaacgtggtcaggtac
ctggacaagaccgaaggcaagaccttcttcgggatcttcgccctgtga

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