Chiloscyllium plagiosum (whitespotted bambooshark): 122548839
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Entry
122548839 CDS
T08871
Name
(RefSeq) dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cpla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
122548839
Enzymes [BR:
cpla01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
122548839
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Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
DUF4962
Motif
Other DBs
NCBI-GeneID:
122548839
NCBI-ProteinID:
XP_043543613
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Position
4:9489727..9525198
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AA seq
1198 aa
AA seq
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MALGGSGCLLLLLLLLCYGLAERSGRWKRSGASVSEGPKRLPHPLLYFDPSDVSGLRQKS
HSSSHSAITRAIRSAVGTMLGKPNFYLPPSDHLSFSAKWNEVYGNNLGVLSLYCLLYPED
QAALDFTLDYLDRMASYPQWQVRVAPNDEVPVAHSLTGFATAFDFLYPFLDAARRQSYLE
KIHGVTKELYEFSKYRAWGKHYLHNHQATNIVALLVGALVLSPHRPQTALLCKQIAVDVM
EKTMFLLDHVVDGSLDEGVAYGSYTARSVTQYVALALRHFHLNHTGSPWLKQHFWFYYAT
LLPGFQRTVGIADSNYNWFYGPESQLVFLDRYVLRNGSGNWLAKQIRKHRPKDGPMEPSS
AHKWCTLHTEYIWYDPDLSPQPPPGHGTPSLHVFSNWGVITYGGGLPSDPGNTFISFKSG
KLGGRAVYGIVHESPYSWIDGWRNFNPGHEHPDQNSFTFAPGGQVFVSEALYGPKYSHLN
NVLVFAPSPSSQCNQPWEGQLGECGQWLNWMAGEAGSSAGELVTATQDGGMLFASGEAAP
AYSSSMRLRSVYRAVLLLNPQVLLVVDHIEKRQGSPLQLVSAFFHNLDIDFKYAAHQTAG
RLHGAMMDVWDAEYTMFWFDHRGGSPTARIQEAEQAAEFKKRWTQYVNVTFPLGAQVTRV
AYIFHGPRARVTDCRFIDDSARGFRLALTVNGTELLVSVVTQYGDPTSRFRYLGFGGYAK
VEDGRRVTRFGFGTTPSGGAGRPGPALLRFGPAVRSLLSAGLCFGLVLVAARWKLCISFG
RLLRLALLAVITLWFLELVALWGTCSRPPCGMGWGTGGRDGGKGEGGPSEQWDEGLGRMS
PVVVISLPGSGAEMLKHLFANSTDFIYIRVPTEHLDLPEVEFEFDSFVDACEWKESDVRV
GRYRLIQGWLQSLVHNTKLHLQNIALHGPPRGAPAVNNSPPLRKRKARRRTSQLDQNSKY
KENLERDAEYIKGLRRHLASYPNARVVLSLSSGSWTLKLPFVQAVIGSSMRALYVVRDPR
AWVYSLLYNSKPSLYSLRNVPQHLAMLFRDDQRKERCRPDSGYAFEYESLRRQFAETEKD
PVSLLAHLWLANTRATLRVNKKLPPGNYHLLKFEDLVEAPQETAERVYAFLGFVLPPAAL
NRILFATSTNLFHLPFEGEVSPGSLHTWRDRMPPKDIRVIEDTCWSVMSQLGYTRSTS
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaggaggcagtggctgcttgctcttgctgctgctgctgctgtgctacgggctg
gccgagcggtctggccgctggaagaggagcggagcgtcggtatctgaggggccgaagcgg
ctacctcaccccctgctgtacttcgaccccagcgatgtgagcggcctgcggcagaagtcc
cacagcagcagtcattcagccatcactcgggctatcaggagtgctgttggcaccatgctg
ggcaaacccaacttctacctgccccccagtgaccacctcagcttctctgccaagtggaac
gaggtttatggcaacaatctgggggtgctgtccctctactgcctcctgtacccagaggac
caggcagctctagacttcacccttgactacctagaccgaatggccagctaccctcagtgg
caggtgagggtggcacccaacgatgaggtgccagtcgcccattccctgaccggctttgct
accgctttcgacttcctctacccgttcctggatgcggcgcggaggcagagctacctggag
aagatccacggagtgaccaaggagctgtacgagttctccaagtaccgggcctggggcaaa
cactacttgcacaaccaccaggcgaccaacatcgtggcgttgttggtgggcgccctggtg
ctgagcccccaccggccacagaccgccctgctgtgcaagcagattgccgtcgacgtgatg
gagaagaccatgttcctgctcgaccacgtggtggatggctccctggacgaaggtgtggcc
tacggcagctacaccgcccgctccgtcacccagtacgtggcgctggccctgcggcacttc
catctcaaccataccgggagcccctggctcaagcagcatttctggttctactacgccacc
ctgttgcccggcttccagaggactgtgggcatcgctgactccaactacaactggttctac
ggtccagagagccagctcgttttcctggacaggtacgtgctgaggaacggcagtgggaac
tggctggccaagcagatcaggaagcatcggcccaaggatggcccaatggagccctccagt
gcccacaagtggtgcaccctccacaccgagtacatctggtacgacccggatctgagccca
cagccgccccctggccacggcacgccgagcctccatgtcttctccaactggggggtcatc
acctatgggggcggtctgcccagcgatccgggaaacaccttcatctcgttcaagtcgggg
aagctgggcgggcgggcggtctacgggattgtccatgagagcccgtactcctggatcgac
ggctggaggaacttcaacccgggtcacgagcacccggaccagaactccttcacctttgct
cccggcggccaggtcttcgtgtcagaggctctgtacgggcccaagtacagccacctcaac
aacgtgctggtctttgcgccgtcacccagcagccagtgcaaccagccctgggagggccag
cttggtgagtgcggccaatggctcaactggatggcgggtgaggctggcagctcagcgggt
gagttggtgacggccactcaggatggagggatgctgtttgccagcggtgaggccgctccc
gcctactcctcctccatgcgcctccggagcgtgtaccgggcagtgctcctgctgaacccc
caggtgctgctggtggtggaccacatcgagaagcgccaaggctccccgctccagctggtc
agtgccttcttccacaacctggacatcgacttcaagtacgcggctcaccagaccgctggc
cgcctccacggtgccatgatggacgtctgggacgcggagtacaccatgttttggttcgac
caccgcgggggcagcccgaccgcccgcatccaggaggcagagcaagcggcggagttcaag
aagcgctggactcagtacgtcaacgtgaccttcccgctgggcgcgcaggtcacgcgcgtg
gcctacatcttccacgggccgcgggcacgggtcaccgactgccgcttcattgacgactca
gcccggggcttcaggctggcgctgaccgtcaacggcaccgagctgctggtgtccgtggtc
acccagtacggtgaccccacctcccgcttccgctatctgggcttcgggggttacgccaag
gtggaggacgggcgccgggtgaccaggttcggttttgggaccaccccgtccggaggcgcg
gggcggcctgggccggctctcctccgcttcgggcctgcagtgaggagcctcctgagcgca
ggcctttgcttcggcctggtgctggtggccgccaggtggaaactctgcatctccttcggg
cgcctgttgcgcctggccttgttggcggtcatcaccctgtggttcctggagctggtggca
ctgtggggcacctgctcccggcccccctgcggcatgggctgggggaccgggggcagggat
ggcggcaagggcgagggagggccctctgagcagtgggatgagggcctggggagaatgtcg
ccggtggtggtcatctcgctgccaggctctggggcggagatgctgaagcacctcttcgcc
aacagcaccgacttcatctacatcagggtcccgacagaacacctcgacctgcccgaggtg
gagtttgaatttgattcctttgtcgacgcctgtgagtggaaggagtcagacgtgagggtg
ggtcgttaccgcttgatccagggctggctccagtccctggtccataacaccaagctccac
ctacagaacattgccctgcatggtcccccccggggagcccctgcggtgaacaacagcccc
ccgctccgcaagaggaaggctcggagaagaacctcccagctggaccagaactccaagtac
aaggaaaacctggagagggacgcagagtacatcaaggggctgaggaggcacttggcctcc
tatcccaatgcccgggtagtgctcagtttgagcagcgggagctggaccctgaagctgccc
tttgtgcaggccgtgatcgggtcttcgatgagggccctgtatgtggtgagggatcctcgt
gcctgggtctactccctgctctacaacagcaagcccagtctttactccctgcggaatgtg
ccccagcacctggccatgctcttccgagatgaccagcgcaaggagaggtgtcgtccggac
tccggctatgcctttgagtacgagtccctccggagacaatttgcggagacggaaaaggac
ccggtgtccctcctggctcacctgtggctggccaacacccgggccacgctgagggtgaac
aagaagctgccgcctggcaactaccacctgctgaagttcgaggacctagttgaggcacct
caggaaaccgctgagagagtctacgccttccttggcttcgtgctccccccggccgccctg
aaccgcatccttttcgccacctcaaccaacctgttccacctcccgttcgagggtgaggtc
tcgcctggcagtctccacacctggagggacaggatgcccccaaaggacatcagggtcatc
gaggatacctgctggtcagtgatgagccaactcggctataccaggtcgaccagctga
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