Chiloscyllium plagiosum (whitespotted bambooshark): 122551090
Help
Entry
122551090 CDS
T08871
Symbol
smpd1
Name
(RefSeq) sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00600
Sphingolipid metabolism
cpla01100
Metabolic pathways
cpla04142
Lysosome
cpla04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
122551090 (smpd1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122551090 (smpd1)
09143 Cell growth and death
04217 Necroptosis
122551090 (smpd1)
Enzymes [BR:
cpla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
122551090 (smpd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASMase_C
Metallophos
Motif
Other DBs
NCBI-GeneID:
122551090
NCBI-ProteinID:
XP_043548668
LinkDB
All DBs
Position
6:complement(119026831..119048808)
Genome browser
AA seq
544 aa
AA seq
DB search
MDEVAVVASKLCVRLKLAPPDICVQAVALFKHDVIIAWTESILKPSEICGLFLGVVCGHW
DIYSDWNVTLPDTPKPPVIPPKPPLPGSPVTRILFLTDIHWDKDYIPGSNPDCRDPLCCR
KGSGLPPSHRKGAGKWGEYSKCDLPLHTIENLLQHLQPGHFDLVYWTGDIPAHDVWHQTR
KDQLTALNTITRLIQKYLGHVAVYPAVGNHESTPVNSFPPPFIHGNESSAWLYDAMVQAW
KGWLPEEAQETLRRAGFYTVKLNPGLRLVSLNMNFCSHENFWLLVNSTDPAGQLQWLVSI
LQEAEDSGDKVMREWARQAVHSSPQASDVRLNQSGNRFQRAHSSGETVNSSGSRIFFNNC
PRYEGTIAAQFFGHTHVDEFEVFYDEETLSRAVSVAFISPSVTTYINLSPGFRVYQIDGN
YPASSHSVLDHETYILNLTEANEGDNPRWVFLYRLREAYGMKSAFPVDMDNLINRFLLDD
SLFQRYWFLYHKGHTSQPCQQACKTATICALRTGRADDPALCKDLHNKVTYRETQSFWRQ
RRMC
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggtagctgttgttgcctcgaagctgtgtgtccggttaaagctggcccctccg
gatatctgtgtccaggccgtcgccttgttcaaacacgatgtgataattgcctggactgaa
tctatcctgaagccatcagagatctgtggcttgttcctgggtgttgtttgtggtcattgg
gacatttactctgactggaatgtcacactccctgacacaccaaagcctcccgtcatcccc
cccaagccacccctccctggttctcctgtcacaaggatactatttctcacagacattcac
tgggacaaagattacatcccagggagtaaccctgactgccgggaccccttgtgctgcagg
aagggctcgggtttaccccctagccatcggaaaggagctgggaagtggggtgaatacagc
aagtgtgaccttcccctccacaccatcgagaaccttctacagcatcttcaacctggacac
tttgatctggtctactggactggggatattccagctcatgatgtctggcaccagacccgg
aaagaccaactcacggctctcaacaccatcaccagactcatccagaaatacctgggccac
gttgctgtctacccagccgttggcaatcatgagagcactccagtcaacagcttccctcct
cccttcatccacggtaacgagtcctctgcctggctctacgatgcaatggtgcaggcctgg
aagggctggctgcctgaggaagctcaggaaactctccggagagcggggttttacacagtg
aaactcaatcctggactgcgacttgtttcactcaacatgaacttctgttcccatgagaac
ttctggctgttagtgaactcgactgatccagctggtcagctgcagtggctggtcagcatc
ctgcaggaagcagaagacagcggtgacaaggtaatgagggagtgggccaggcaggcagta
cattcctcaccccaggcatctgacgtgagactaaaccagtcgggtaacagatttcaaagg
gcacacagctctggtgaaacagtcaattcttcaggaagtagaattttcttcaacaactgt
cccaggtatgaggggacaattgctgcccagttttttggccatacccatgtggatgagttt
gaggttttttacgatgaggagactctgagccgtgcagtgtctgttgctttcatttcccca
agtgtcacaacgtacatcaacctcagtccagggtttcgggtttaccagattgatgggaat
tatccagcgagttcacattcagttcttgaccatgagacctacatcctgaacctgactgag
gccaatgagggagacaatcccaggtgggttttcctgtacaggctccgggaggcctatggg
atgaagtctgcgtttcctgtcgatatggataacctgatcaaccgcttcctgctcgatgac
agtctcttccagaggtactggttcctgtaccacaagggccacacttcccaaccgtgtcag
caagcctgcaagactgccaccatctgtgcccttcgtacaggcagagcagatgaccctgca
ctttgcaaggaccttcacaacaaggtgacatacagggaaacacagagcttctggaggcag
cggagaatgtgctaa
DBGET
integrated database retrieval system
