Chiloscyllium plagiosum (whitespotted bambooshark): 122552693
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Entry
122552693 CDS
T08871
Symbol
mtr
Name
(RefSeq) methionine synthase isoform X1
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00270
Cysteine and methionine metabolism
cpla00450
Selenocompound metabolism
cpla00670
One carbon pool by folate
cpla01100
Metabolic pathways
cpla01230
Biosynthesis of amino acids
cpla04980
Cobalamin transport and metabolism
cpla04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
122552693 (mtr)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
122552693 (mtr)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
122552693 (mtr)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
122552693 (mtr)
04980 Cobalamin transport and metabolism
122552693 (mtr)
Enzymes [BR:
cpla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
122552693 (mtr)
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CdhD
Motif
Other DBs
NCBI-GeneID:
122552693
NCBI-ProteinID:
XP_043551493
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All DBs
Position
9:complement(21702451..21786804)
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AA seq
1276 aa
AA seq
DB search
MIVQNRTVIKAVHDRAAHEREFQGSRSSFQDELKAILRKRIMVLDGAMGTMIQQHKLGED
DYRGEEFKDHPKPLKGNNDLLSITQPDLICKIHKDYLLAGADIVETNTFSSTRVAQADYE
LEHLAYRLNKVSAELARKAADDVGMQTGTQRFVAGAIGPTNKTLSISPSVERPDYRNITF
EELVEAYEEQARGLLDGGIDILLVETIFDTANAKAALFAIQQLFAEQYESRPLFISGTIV
DKSGRTLSGQTGEAFVISVSHAEPLSIGLNCALGAAEMRPFIEAIGKCTTAYVLCYPNAG
LPNTFGGYDETPDVTAKYLKEFAMDGLVNIVGGCCGTTPAHIRAIAEAVQKCRPRIPPPS
VFGDFLLLSGLEPFKVGPYTNFVNIGERCNVAGSRNFAKLIMAGNYEEALNVAKSQVKMG
AQILDINMDDGMLDGKSAMTRFCNLVATEPDIAKVPLCIDSSNFAVIEAGLKCCQGKCVV
NSISLKEGEEDFLEKAHIIKRFGAAVVIMAFDEKGQATETNDKVEICTRAYELLVNRVKF
NPNDIIFDPNILTIGTGMEEHSLYAENFIKATSIIKIKLPGARISGGLSNLSFSFRGMEM
IREAMHGVFLYHAIKAGMDMGIVNAGKLPVYDDIDKELLELCENLIWNKNPAATEKLLQY
AQNHTTGGKKTMHTDEWRNGSVEERLVYALIKGVEKYVVEDTAEARANQEKYARPLHIIE
GPLMNGMKVVGELFGTGKMFLPQVVKSARVMKKAVNYLIPFMEKEREERLAQSGHSEEMS
PYQGTILLATVKGDVHDIGKNIVGVVLACNNFRVVDLGVMTPCDKILRAAIENKADIIGL
SGLITPSLDEMMYVAKEMERLNMKIPLLIGGATTSKTHTAVKIAPKYNAPAIHVLDASKS
VVVCSQLLDDYLKDDYFEEVTEEYEEIRQDYYDSLMERNYLTLEQARNRGLHIDWLSHPK
PVKPTFIGTQSFADYDLRRLISYIDWKPFFDVWQLKGKYPNRGYPKIFKDKTVGEEAKKL
FEDAQDMLNTLIEAKKLTVKGIIGFWPAQSVGDDIHLFAKDTYPRLGEPIAKFHGLRQQV
DKNSISTEKYYCISDFIAPKDSGVPDYIGMFAVACFGAERQSKQYEEEGDDYSSIMVKAL
ADRLAEAFAEELHVRVRKEFWGYSPDESLDIASIHRIKYVGIRPAPGYPSQPDHTEKITM
WKLASIEETTGITLTESLAMTPAAAVSGFYFSSPQSMYFAVGKITKEQVEDYAARKQMKV
EEVEKWLGPILGYETD
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtccagaacaggacagtcatcaaggcagtccatgacagagcagctcatgagagg
gaatttcaaggatcaaggagttcttttcaagatgaacttaaagcaattttacgaaaacgc
atcatggtgctagatggagcaatgggtactatgattcaacaacataaacttggtgaagat
gattatcgtggtgaggagttcaaagaccatcctaaacctttaaagggaaacaatgatctt
ctcagcataacacaacctgaccttatctgcaaaattcataaggactacttgttggcggga
gcagatattgtggaaacaaacactttcagtagcacaagagtagcacaggcggattatgag
ttggaacatttggcttaccgactgaataaagtctcagcagaactggccagaaaggcagct
gatgatgtgggaatgcaaacaggtacccaaagatttgtggcaggtgcaataggaccaacc
aacaaaacattatcaatatcaccatctgtggagaggcctgactacagaaatataacattc
gaggaattagttgaagcttatgaagaacaagccagaggcctactggatggtggtattgat
atcctcctggtggagaccatttttgatacagcaaatgcaaaggctgccttatttgctatt
cagcagttgtttgcggaacaatatgaatcaagacctctctttatttctggaacaattgta
gataagagtggacgcacactttctggtcagacaggagaagcctttgtcatcagtgtatcc
catgcagagccactcagcattggattaaattgtgctttgggagctgcggaaatgaggcca
ttcatagaagcaattggaaagtgcacaactgcttatgttttatgctatcctaatgcaggc
cttcccaatacatttggaggctatgatgaaactcctgatgtcactgcaaaatacctcaag
gaattcgccatggatgggctagtgaacattgttggagggtgctgtggaacaactccagct
catatccgggcaatagcagaagcagtccaaaaatgtagacctagaattcctcctccatct
gtttttggagacttcctgttactgtcaggtcttgaaccgttcaaagttggaccatatacc
aactttgtcaatattggagaacgttgcaatgtggcagggtctagaaattttgcgaaactt
attatggcaggtaattatgaggaagccttgaatgtagcaaaatcacaagtaaaaatggga
gcccaaatcctggatatcaacatggatgatggaatgttagatggcaagagtgctatgacc
agattctgtaaccttgtagcaacagaaccagatattgccaaggttccattgtgcattgat
tcttctaattttgctgtgattgaagcgggcttgaagtgttgccagggcaagtgtgttgtg
aatagcatcagtttgaaggaaggtgaggaagactttctggaaaaggcacacattattaaa
cgctttggggctgctgtcgtaataatggcatttgatgagaaaggacaggcaactgaaact
aatgataaagtggaaatatgtactagagcctatgagctgcttgtgaacagagtgaaattt
aatccaaatgatataatatttgatccaaatatactgacaattggaactggaatggaggag
catagtctgtatgctgaaaattttatcaaggctacttcaattataaagataaagttacct
ggtgctagaataagtggaggcctttctaatttgtctttttcatttcgaggaatggagatg
attcgtgaagccatgcatggtgtgttcctttaccatgctataaaggctgggatggatatg
ggaattgtgaatgcaggaaagttgcctgtttatgatgacatagacaaagaacttctggag
ctatgtgagaatttgatctggaacaaaaatcctgcagctacagagaaattattgcaatat
gcccagaatcataccactggtgggaaaaaaactatgcatactgatgaatggaggaatggt
tctgttgaggaacggcttgtctatgctctgataaagggtgtagaaaaatatgtagtagaa
gatacagcagaagcaagagccaatcaagagaaatacgccaggcctttacatataatcgaa
ggccctctcatgaatggaatgaaagttgtaggagagttatttggaacaggaaaaatgttt
cttccacaggttgttaaatctgctcgtgtaatgaaaaaagctgtgaattaccttatcccc
ttcatggagaaggagagagaggaaagactggcacagtcaggtcattcagaagaaatgagc
ccatatcaaggcactattttgttagccactgtgaagggagatgttcatgacattggcaag
aacattgttggtgtggtattggcttgcaacaacttcagagtggttgatctgggagtgatg
actccatgtgataagatactgcgagcagctattgagaataaagcagatattattggacta
tctggtctgataacaccatctttggatgagatgatgtatgttgccaaggaaatggaacga
ttgaatatgaaaatacctttactgattggtggagcaacaacctcaaaaacacacaccgct
gtgaaaattgcaccaaagtataatgcacctgctattcatgtcctagatgcttcgaagagt
gttgttgtgtgctctcaacttttggatgattaccttaaggatgactactttgaggaagta
actgaagaatatgaagagattcgacaggattattatgattctttaatggaaagaaattat
ttaacattagagcaagccagaaatagagggctccatatagactggctttctcatcctaag
ccagtgaaaccaacatttattggcacccaatcctttgcagattacgatttacggagactg
ataagctatattgattggaaacctttctttgatgtttggcagctgaagggaaagtaccca
aatcgtggatatcccaaaatctttaaagataaaactgttggtgaagaagccaaaaagttg
tttgaagatgcacaggatatgctgaatacgctaattgaagcaaagaaattgactgtcaag
ggaattataggattctggccagctcaaagtgttggggatgatatacacttgtttgcaaag
gatacttacccccgccttggtgaaccaatagctaagtttcatggtttaaggcaacaggtg
gacaagaactccattagcacagagaagtactactgcatttctgatttcatagcacctaag
gattctggcgtgccggattacatcggcatgtttgcagtggcgtgctttggtgccgaacgt
caaagcaagcaatatgaggaggagggtgatgactacagcagcataatggttaaagccttg
gcagacagactagctgaggcatttgcagaagagctgcatgtgagagtccggaaggaattt
tggggatactcccctgatgagagcctggatattgctagtatacatagaatcaaatatgtg
ggaattcgtccagctccagggtacccaagccaacccgatcacactgagaaaataacaatg
tggaaactagccagtattgaggaaacgacaggaattacattgacagaatctttggctatg
actccagctgcagcagtctcaggcttttatttttccagtccacaatctatgtattttgct
gttggaaaaattacgaaggaacaggttgaggattatgcagccagaaaacagatgaaagta
gaagaggttgagaaatggctgggacccattttaggatatgagactgactga
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integrated database retrieval system
