Chiloscyllium plagiosum (whitespotted bambooshark): 122552801
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Entry
122552801 CDS
T08871
Name
(RefSeq) TNF receptor-associated factor 5-like isoform X1
KO
K09849
TNF receptor-associated factor 5
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04217
Necroptosis
cpla04621
NOD-like receptor signaling pathway
cpla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122552801
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122552801
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122552801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122552801
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
122552801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
Zn_ribbon_ACC
zf-TRAF_2
TolA_bind_tri
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-RING_UBOX
zf-RING_5
zf-RING_2
DUF724
zf-RING_6
DASH_Duo1
Fez1
PsiB
YlbD_coat
Motif
Other DBs
NCBI-GeneID:
122552801
NCBI-ProteinID:
XP_043551693
LinkDB
All DBs
Position
9:39573982..39641959
Genome browser
AA seq
562 aa
AA seq
DB search
MASEDSCGVKSGVFIRQDSSSTSLSLGFDPYQAGLNLQFVEPLEDRYKCVTCSFVLCNPY
QTGCGHRFCENCIAELTETKPIAVCPIDHERIITNWLFRDNCCKREVWNLMVYCKNSPAC
NVKTSFGRLGDHLKKCEFEHVACINGCDAILHRKDLIDHLQTVCEYREEACQYCKVKLIF
KNIKEHEAVACPNFPIQCTYNCGKSLLRSELDSHLMECPEAEVECSYKKYGCHVKEKRWM
IREHEHSYLNEHLLLVVTINTKLEEQILDLKNTLCERNQAIIQLEEQISKLDMEMRQLNG
HISKNDDEVARTQKMLAGHTDKIIKIEQQSQQLCRRFDEEGRSEISALKEIINVLKEKVD
CAENSIASLATFEPCLKQHESLLNAHKKLLEKNDERFRVIEATSYNGKLIWKINNYKARK
QEAAEGRAPSLFSQPFYTSRCGYRLCARAYLYGDGTGKGTHLSLFFVVMKGDYDSLLAWP
FKQKVTLLLLDQGPKKNHIVEFFKADASSTSFQRPVSEMNIASGCPKFVSHTVLESGKTA
TFIKDDTLFIKVIVDLSDLEDL
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgaagatagctgtggagtcaaatcaggtgtattcattcgtcaagatagttcc
agcacgtcactctctctagggtttgacccatatcaggctggattaaatcttcaatttgtt
gaaccattagaagataggtacaaatgtgtcacttgttcatttgtactttgcaatccatac
cagactggatgtgggcatcggttttgtgaaaattgcattgcagaattaacagagactaaa
cctattgctgtttgtcccattgatcatgaaaggattattacaaattggctatttagagat
aattgttgcaagagggaagtatggaatttgatggtgtactgtaaaaattcaccagcctgt
aatgtaaaaacatcattcggacgtttaggggatcaccttaaaaaatgcgagtttgaacat
gtagcatgtatcaatggttgtgatgctatcttacatagaaaagatttaattgatcatttg
caaacagtgtgtgaatatagagaagaagcctgccaatattgcaaagtgaaactgatcttt
aaaaacattaaggagcatgaagcagttgcatgtccaaattttccgatccaatgtacatac
aattgtggtaaaagtttattaagaagtgagcttgactcacacttgatggaatgtccagaa
gctgaagtggaatgtagctacaaaaaatatggttgccatgtcaaggaaaagcggtggatg
ataagggaacatgaacattcttatttaaatgaacatttgttgctcgttgttacaatcaat
actaaattagaagaacagattttagatttaaaaaacactttatgtgaaaggaatcaagcc
atcattcaattagaagaacagatcagcaaacttgacatggaaatgaggcaattaaatggg
cacatttccaaaaatgatgatgaagttgcaagaacacagaaaatgctagctgggcatact
gacaaaataataaagattgagcagcaatcacaacaactttgtagaagatttgatgaagaa
ggaagaagtgaaatctcagccctgaaggaaatcatcaatgtgttaaaggaaaaagtggat
tgtgctgaaaatagcattgcatcactagccactttcgagccctgcctgaagcaacatgaa
tcattactaaatgctcataagaaacttctggagaagaatgatgaaagatttcgagttatt
gaagctactagctacaatggtaaactgatttggaagatcaacaattacaaagcacgaaag
caggaagcagcagagggacgtgcaccttctcttttcagccagcccttttacaccagtcgc
tgtggatataggttatgtgctagggcatacttgtacggagatggcacaggcaaaggaaca
cacctatctttgttttttgtggttatgaaaggtgattatgactctctcttggcatggcca
ttcaagcaaaaggtcacccttttactgctcgaccagggtcctaagaaaaaccatattgta
gagttctttaaggctgatgccagcagcactagctttcaaaggccagtttctgaaatgaat
atcgcatccggatgtccaaagtttgtatctcacactgtgcttgaaagtgggaaaactgca
acgtttatcaaagatgatacattatttatcaaagttattgtagatttatctgatcttgaa
gatctataa
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