Chiloscyllium plagiosum (whitespotted bambooshark): 122553534
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Entry
122553534 CDS
T08871
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04620
Toll-like receptor signaling pathway
cpla04621
NOD-like receptor signaling pathway
cpla04622
RIG-I-like receptor signaling pathway
cpla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
122553534 (traf3)
04621 NOD-like receptor signaling pathway
122553534 (traf3)
04622 RIG-I-like receptor signaling pathway
122553534 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122553534 (traf3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
Sina_ZnF
zf-C3HC4
zf-C3HC4_2
zf-TRAF_2
zf-rbx1
TPR_MLP1_2
DUF724
Fez1
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
122553534
NCBI-ProteinID:
XP_043553390
LinkDB
All DBs
Position
10:38259052..38342678
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AA seq
617 aa
AA seq
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MYQPHWSSLSPGRRGTFLARFCQAFVQGDFWVLQPRSGRPLAMATARNIESSAPQLSLMQ
QTNVANVPNSRLSSLSIEPDDGGFKEKFVLKLENKYKCEYCHLALCNPKQTECGHRFCES
CVRKIIGSPKPVCPVDNVPLFENTIFKDICCKKEVLALHVFCRNEINGCKKQLPLGNLEG
HLLECPHQEVRCARRGCTEMVQRKDLADHLNSSCKYREQTCKYCRDEVAIAELKKHEEFD
CLSFPVPCPNKCNARILRGELNSHQLQCLNVVMTCPFSKYGCNFQGTNQQLKMHEADSMA
QHLNSVLMKNGDLETTIFELQNKLQEKSKMIDIMSAQISHLEKEQSKLAQLATKNESRLG
YMQKMLASQTDKLMNIDQASQQTYQKQEESVREVKTLEESVDKLQIQLRQLELAGRAGGM
ATGAANLSALDNQVKRHGSLLSVHDVRLADMDLRFQVLETASYNGKLIWKIRDYARRKQE
AVSGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFK
QKVTLMLLDQAPTKSHLGDAFKPDPNSSSFKKPVGEMNIASGCPLFVAQTVLESGTYIKD
DTIFIKVVVDTSDLPDP
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagccgcactggagctctctgtcgcccgggagaagaggaacatttctcgctcgg
ttctgccaggcatttgtgcagggagacttctgggtcctgcagcctcgatctggacggcca
ttggccatggcaactgcaagaaacatagagtcatcggccccacaactttccctgatgcag
cagaccaatgtggctaatgttccaaatagcaggctgtcatctctaagcattgaaccagac
gatgggggcttcaaggagaagtttgtactgaagctggaaaacaagtacaaatgtgaatat
tgtcatcttgcactgtgcaatcccaaacagactgaatgtggccacagattctgtgaaagt
tgtgtaaggaaaatcattgggagtccgaaaccagtttgtccagtcgataatgtgccttta
tttgagaatacgattttcaaggacatctgctgtaaaaaagaggttcttgcacttcacgtc
ttctgtaggaatgagataaatggctgcaagaaacagctacctcttggaaatcttgagggt
cacttacttgaatgtcctcaccaggaagtccgctgtgcacgcaggggatgcacagaaatg
gtgcaaaggaaagatctcgctgaccatttaaattcaagctgtaaatatcgggagcaaacc
tgtaaatactgcagggatgaagttgctattgctgagttaaaaaaacatgaagaatttgac
tgtctgtcattcccagtgccatgtcccaataagtgcaatgctcgtattctgaggggagag
ttaaatagtcatcagttgcaatgtctcaatgtggtcatgacttgccctttctctaagtat
ggatgcaacttccaaggaaccaaccagcaacttaaaatgcatgaagctgatagtatggct
caacatttgaactctgtgttgatgaagaatggagatctcgaaactacgatttttgagctt
cagaacaagttgcaggaaaagtctaaaatgattgatattatgtcagctcaaataagccac
ttggagaaggaacagagtaaattagcacagcttgcaaccaaaaatgaaagtcgacttgga
tacatgcagaaaatgttagctagtcagacagataagttgatgaatattgatcaagcatca
caacagacttatcagaagcaggaggagtctgtgagagaggtgaaaactttggaagaatct
gtagacaagctccaaatccaactccgacagctggaactagcgggcagagctggtgggatg
gccacaggagcagcaaacctgagtgcattggataaccaagtaaaaagacatggcagcctt
ctcagtgtacatgatgtgcgcttagcagatatggacctacgctttcaagtgctcgaaacg
gcaagctacaatggaaaattaatttggaaaatccgagattatgcacgccgaaaacaggaa
gctgttagtggaaaaacattgtccttgtatagccagccattttacactggatattttggc
tacaagatgtgtgctcgggtttacctcaatggagatggcatgggcaaaggaactcacttg
tcgctgttttttgtcgttatgcggggagaatatgatgcactgttaccgtggccctttaaa
cagaaagtaactttgatgttattagatcaagcaccgacaaaaagccatttaggtgatgcc
tttaagccagatcccaacagtagtagttttaagaaaccagtgggagagatgaatattgct
tcaggctgcccactctttgttgcacagactgttttggaaagtgggacatatattaaagat
gacactatcttcataaaagtagttgttgatacctcagatttgccagatccatga
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