Chiloscyllium plagiosum (whitespotted bambooshark): 122554942
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Entry
122554942 CDS
T08871
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04110
Cell cycle
cpla04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122554942 (rb1)
04218 Cellular senescence
122554942 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpla01009
]
122554942 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122554942 (rb1)
Protein phosphatases and associated proteins [BR:
cpla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122554942 (rb1)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
122554942 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
Msl2-3_C
Motif
Other DBs
NCBI-GeneID:
122554942
NCBI-ProteinID:
XP_043556319
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All DBs
Position
12:7198831..7396007
Genome browser
AA seq
930 aa
AA seq
DB search
MPPKPLKRTAAGGSEESLSPARHDHKEANFVLLCQSLKVGENVKERAWKIWESVSVLLND
SIVLAATRKYLGICIFIAAVDLNAVSFTLTDLQKTLDLNVTEFLQLLKKMDVNLDTVSTK
VNSLVLKLEKKCLVFTALFEKFKRICEKIFVEAPDIQASSETNKPVVKICWITFLLATGK
LLQMEDDLVLSFQLLLCVLEYFIKISPPTMIKEPYRAAANSVISSGLSRSSRRSQTRISQ
TANSVEVDARVMEILCKENECNVEEVKNIYLKSFLPFLDNLKIPCSGGFPEIESLSRQYE
ELYHKNKDFDGRLFLEQDKTLQIDPDQRCELERTPKKWQTEDSHTVIPPQTPVRTAMNTI
QQLQMILNTADDKPSNTLKAYFDNCTVNPTNDIISRVENLGHKFRESFAQAVGEGWVEIG
SQRYKLGVRLYYRVMESMLKSLLITQSHRPFTEEERLSVQNFSKLLNDATFHGSLHACAV
EVVMTTYGTTWNITLTGDIQAETDLSFPWILRVFDIKAYEFYKVIESFIKAEPNLTREMI
KHLERCEHRIMECIAWQTDSPLFDILRQQKEQEDQPDQPEPTSSLKQPFQHNHTAADLYL
HPERSPQKKGSCSAHEVPTQQAKIETPSAGQSQFQPQQKPQKFTSVSLFYKKLYRLAYLR
LNTLCNHLCLPSDHPPLEAIIWTLFQHTLGNEYELMRDRHLDQIMMCSMYAICKVKNIDL
RFKTIVTAYKDLPNTSQETFKHVLIREGQYDSIIGFYNLVFMQRLKTNILQYASTRPPTL
SPIPQVPRSTFGFPSSPLRVPGGNNIYVSPLKSPYKSDGLLSPTKLTPRTRILVSIGEPF
GSPEKFQKINQLVSSSDRHLKRAGDAGSLPKPLKRLRFDMDGQDETDGSKHLSGESKLLQ
QKIAEMTSTRNKMQEQKLKDGNGGMKREES
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgccccccaagccgttgaagagaacggccgctggtggctctgaggagagcctctctccg
gccagacatgaccacaaagaagcaaactttgtcttactgtgccaaagccttaaagtaggc
gaaaatgtgaaggagagggcttggaagatttgggagtcagtatcagtgcttttaaatgat
agtattgtattggctgccacacgaaagtatttgggtatctgcatcttcattgcagctgta
gacttgaatgcagtttccttcactctgacagatttgcagaaaacattagatctgaatgtg
actgagtttttgcagttgctgaagaaaatggatgtgaacttggacactgttagcactaaa
gtaaattcactggtattgaaactggagaagaagtgccttgttttcactgcactctttgaa
aaatttaaaaggatatgtgaaaagatatttgtggaggcaccagatatccaggcatcatct
gaaactaataaaccagtggtgaaaatctgctggatcacatttctactggcaacaggaaag
ctgctacagatggaagatgaccttgtgctctctttccagttgttactttgtgtcttggag
tactttatcaagatctcaccccctacaatgattaaggaaccttacagagctgctgcgaac
agtgtaatttccagtggcctgtcacgatcttctagacgaagtcagaccagaatttcacaa
acagccaattcagttgaagtagacgccagagttatggaaatcctttgtaaggaaaatgag
tgcaatgtggaagaggtgaaaaatatctatttgaagagctttcttccttttttggataat
cttaaaataccctgttctggtgggtttcctgagattgagtcactttcaagacaatatgaa
gagctttaccataagaacaaagattttgatggaagattgttccttgagcaagacaaaact
ctgcaaatagatccagaccaaagatgtgaacttgagagaacgccaaagaagtggcagact
gaagacagtcacacagtcattcctccccaaactcctgtcaggaccgcaatgaacaccatc
cagcagttacagatgattttaaatacagctgatgacaaaccttcaaatacacttaaagca
tactttgataattgtacagtgaacccgactaatgatattattagtagagtggagaatctg
ggtcataagtttcgggaaagttttgctcaggctgttggagaaggatgggttgagatcggc
tctcagcgatataagcttggtgtacgtttgtattatagggttatggaatctatgttgaaa
tcgctgctgatcacccagagtcatcgtccttttactgaagaagaacgtctctctgtccaa
aattttagcaagttgttgaatgatgctacatttcatggatctctacacgcctgtgctgtg
gaggtggtcatgaccacatatggaactacttggaacataacgttgacgggtgacattcaa
gcagagactgacctctccttcccgtggatccttcgtgtgtttgatataaaggcttatgag
ttttataaggttattgagagttttattaaagcagaaccaaatctaaccagagagatgatc
aagcacctggaaaggtgtgaacataggatcatggagtgtattgcctggcagactgattca
cctttgtttgacatactccgacaacaaaaagaacaggaagatcagccagatcagccagaa
cccactagttctctcaaacaaccattccagcataaccacactgctgcagacctttatttg
catccagagagatccccgcagaaaaaagggtcttgttcagcccatgaagttcccacacag
caagcaaagattgagacaccatctgctggccagtctcagtttcagcctcagcaaaaacct
cagaagtttacctcagtttctctcttctacaaaaaattatatcgattggcatatcttcga
ttgaacaccctctgcaaccatctttgtctgccatctgaccatcctccgctcgaagctata
atatggactctgtttcaacataccttaggaaatgaatatgaactcatgagagacagacac
ttagaccagataatgatgtgctccatgtatgccatttgcaaggtgaagaacatagacctt
aggttcaagacaattgttactgcctacaaggacttgccaaatacaagtcaagagaccttt
aaacacgtgctgatcagagaagggcagtatgattccattataggcttctacaacctggtg
ttcatgcagaggctgaaaaccaatatcctgcagtacgcttcaacacgtccaccaacactc
tcaccaatacctcaagttcctcgcagtacatttggttttccaagttctccactgcgtgtg
cccggtggaaataacatttatgtatctccattgaaaagtccatacaaaagtgacggacta
ctgtccccaacaaaactgactccaagaacacggatattagtgtctattggggagccattt
gggtcaccagaaaaattccaaaagatcaatcagttagtgagttccagtgatcgtcacctt
aagagggctggagatgcagggagtctgccaaaacctctcaaaaggcttcgctttgatatg
gatggtcaagatgagacggacggcagcaagcacttgtctggggagtccaaactactgcag
caaaagattgctgaaatgacatccacaaggaataagatgcaagaacagaagctgaaagat
ggaaatggtggtatgaagagggaagaaagttga
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