Chiloscyllium plagiosum (whitespotted bambooshark): 122555057
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Entry
122555057 CDS
T08871
Symbol
tiam1a
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04530
Tight junction
cpla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122555057 (tiam1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122555057 (tiam1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
122555057 (tiam1a)
Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
122555057 (tiam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
PDZ_6
PDZ_2
FlxA
DNA_pol_A_exoN
Motif
Other DBs
NCBI-GeneID:
122555057
NCBI-ProteinID:
XP_043556637
LinkDB
All DBs
Position
12:complement(21269153..21596181)
Genome browser
AA seq
1606 aa
AA seq
DB search
MGNSESQNDSERAFSGDERAGLSRKHMSRSLRIPTKTSRRARPASAVRITHRNSETSTKS
SSTPSIPQSLARDGLDVSHPGNLNNALEEEFGRPSWVGRMGKSVRPVSYHTGSSVSSTRR
RSAVQPLHSRDELDICLDNHIIHVIENFDEIRLDSVSQANIEDLHLVTGDETTILESTNI
KKKRSKSADMWRQDSMEFSLSDLSQDRLTSTEDLLDNTDDKGYEKSRLINSNSIDLEQLS
GNQRANSLNELYSQKPTGANMNKTRRNRFKTLPRNLRTHSHNTIQPENINAVAWSAGENA
SVHSYVASTLPCRKSHCLSEGASKGRISHVTDNRTTYVRRSKTTQDITTGDGSECADSGI
DGATMDNDHLSRFSNMTSTTCYPANFNRDLICSDIVTAGDALRQGVYENFRCTLESNPVN
TENPEEAESAMSDEQSSGTLSSPGQSDSQTADQGTVRKAGSLAVKNFLVHKKNKKVELAT
RRKWKYYWVSLKGCTLFFYDGDGRSGVDQSSAPKHMVWIENSIVQAVPEHPKKDNVFCLS
NSLGDAFLFQTCSQTELENWITAIHSACAASVARQYRREDTVKLLQSEIKKLEQKIDMDE
KMKKMGDMQLSSVSDPKKRKTILDQIYLWEQNLEQFQIDLFRHRCYVASLQGGELPNPKR
LLAFASRPTKQAMGRLSIFSVSSFHALVAARTEPALKNQTQVISRSVSKRKNRFSSLWGL
DTNSRKKAKERPSINQLFGDNEATLKKSLEGIFDDCSTDSSREKSLTMTIHPHTRESDNW
VTDFLMPSWVCLPDDRPILVVVHPGNSAQDILEEACKVQYLEPSSHYVRLKFTVNNQIQY
YVPKQEDIHELLYQEIEICPKSIHRVQFDKSDTSVSYGFCVSLVEEEGSHQQMIITEVKE
GGLASSKGLRVGDEVLEINKMKAKDLVVSDLKTILSAPSLSLTLRTIGQPVDGCMCTSPL
RRVVATDALSDSGFVCSHQDTLNNHTEPSHDKERPSESLEPGEACKSTEQVTAFCRGLHE
LSPSNMSSQPSDSLPHQVPSRQLTDADKLRKVICELVETEQTYVKDLNYLLEKYLKPLQK
EVFLTQDELDVLFGNLREMVQFQVEFLKTLEDGVRLVSDLEKLETVNQFKKVLFSLGGSF
LYYADRFKLYSAFCASHTKVPKVLVKAKVNPAFKAFLDAQNPKQQHSSTLESYLIKPIQR
VLKYPLLLKELISLTDSDSEEHYHLTVAMKAMNKVASHINEMQKLHEEYGAVFDQLISEQ
TGEKKEVVDLSMGDLLLHSTVTWLNPPTSFGKCKKDPELAAFVFKTAVVLVYKDGFKQKR
KLGNISQRVSVSDDRDPFKFRHMIPTQALQIRSVATTDVETDCVFEIIHTKSESEGRPET
NFHFCSSTPENKRDIIKAVQSILRDKHRRQLLKTESLPQSQQYIPFGGKRLCALKGARPV
VNRAVSVPCRSLGKKRLSRNRFTIDADDLFGRSQSNESSQSPVTCNDTDRWVEEQFDLGK
YEEQEDVKETDILSDDDEYCQSVKSSTLSKDLQEQLKAMSFTKDSFCENGKLSMHRTPEK
SPSKTAFTAKQKVAAGANGVVENTTAEVIWVKREDFISTEKENDEI
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgggaaattcagagagccagaatgatagtgaacgagcgttttctggagatgagcgtgca
ggtctgtcacgcaagcacatgtctcggtcacttcgcattccaactaaaacttcacgaaga
gccaggcctgcctcagcagtcaggattacacacagaaattccgaaacaagcactaagtct
agtagcactcccagtatcccacaatcactggcaagggatggcctggacgtcagtcatcca
ggaaatcttaataatgctttagaagaagaatttggtcgtccatcttgggtgggtagaatg
ggtaaaagtgtaaggcctgtgtcttaccatacaggttcttcagtttccagtaccaggcga
agaagtgctgtccagccactccattcaagggatgagcttgacatttgtttggacaatcat
attatccatgttatagagaattttgatgaaataagattagactctgtttcccaagcaaat
attgaagatctgcatctagttactggagatgaaacgaccattttagaaagcacaaatatc
aagaaaaaacgatccaaatctgctgatatgtggcgacaagatagtatggaattctcctta
tctgacctaagtcaggatcggttaaccagcacagaagatctgttggataatactgatgac
aagggatatgagaaaagtaggctaataaacagtaattctattgatctagaacaattgagt
ggaaaccaacgtgctaactctctaaatgaactatatagccaaaaaccaacaggtgcaaat
atgaacaaaacgcgaagaaacagatttaagacactccctcggaatttgaggactcattca
cataatacaatacagccagaaaatataaatgctgtggcctggtcagctggagaaaatgca
agtgttcattcatatgttgcctcaacgcttccatgcaggaagtcccattgcctttccgaa
ggagcgtctaaaggacgaataagccatgttactgataacagaaccacatatgtcagaagg
tccaaaacaacacaggacattaccacaggagatggaagtgaatgtgcagatagtggtatt
gatggtgcaacaatggacaatgatcatctttcccgcttttccaatatgaccagtacgaca
tgctatccagccaatttcaaccgtgatttaatttgtagtgatattgtcacagcaggagat
gcacttcgtcaaggggtgtatgagaactttagatgtactttggaatcaaatcctgtcaat
acagaaaatccagaagaagcggagtcagctatgagcgatgaacaaagcagtggtaccctc
agctccccagggcagtctgacagtcaaactgcagatcaaggaactgttcgaaaagcaggt
tcacttgctgtgaagaactttttagtccacaagaaaaataaaaaagtggaactggctaca
cggaggaaatggaaatattattgggtatcattaaaaggctgcactttatttttctacgat
ggtgatggaagatcaggagtggatcagagcagtgcaccaaagcacatggtttggattgaa
aatagcattgttcaggcagtgcccgaacatccaaagaaagataatgtgttctgtctcagc
aattcacttggggatgctttcttatttcagacctgcagccagacagagctggaaaactgg
attactgcaattcattctgcctgtgcagcttcagtggcaagacaatatcgcagagaagat
actgttaaactgctgcagtcagagattaagaagcttgaacagaaaattgacatggatgaa
aaaatgaagaaaatgggagatatgcagttgtcttcagttagtgacccgaaaaagcgaaag
accatacttgatcagatctatttatgggagcaaaatctagaacagtttcagattgatctt
tttcgacatcgttgttatgtggcaagtcttcaaggtggagaattaccaaatccgaaaaga
cttcttgcatttgcaagtcggccaaccaaacaagccatgggtcgtctaagtattttttca
gtgtcttcattccatgccttggtggcagcccgtactgaacctgctttgaagaaccaaaca
caggtgatttccagatctgtaagcaagcggaagaacagattttcctccctgtggggatta
gatacaaattcaagaaaaaaagcaaaagaaagaccgagcattaatcagttgtttggtgat
aatgaggccacactgaagaaatccttggaaggcatttttgatgattgttcaacagatagc
agtagagaaaagagccttaccatgactattcatccacacacacgtgaaagtgacaactgg
gttactgatttcctcatgccttcatgggtctgtttaccagatgatcgacccattttggtt
gttgtgcatccaggaaactcagcacaggacattcttgaagaggcttgtaaggtacaatac
ttggagccaagcagtcactatgtgcgtttgaagtttacagtgaacaaccagattcaatat
tatgtaccaaagcaagaagatattcatgaactgttataccaagaaattgaaatttgccca
aaaagtattcatcgtgttcagtttgacaagtctgatacatctgttagttatggcttttgt
gtatctttagttgaagaagagggatcacaccagcaaatgattattactgaagtaaaagaa
ggtggtttggcttcatctaaaggtctaagagttggagatgaagttttggaaattaataaa
atgaaagccaaagatctggttgtgtctgacttgaagactatcctctctgcaccatcactt
tctctcactctgcgaacaattggtcaaccagtggatggatgtatgtgcacttcacctctt
cgtcgagtcgtggcaactgatgcattgagtgacagtggatttgtttgcagccatcaagat
acgttaaacaaccataccgaaccaagccatgataaagagagacccagtgaatcacttgag
cctggtgaagcatgtaagagcacagagcaagtaacagcattttgtcgtggtctgcatgaa
ttaagtccatcgaacatgtcatcacagccttcagattctttaccccaccaagtgccatct
cggcaactcactgatgctgataaattacgtaaggtcatttgtgaactcgtggaaacagaa
cagacatatgtgaaggatctgaattatctcttggagaaatatttgaaacctctgcagaaa
gaagtctttcttactcaagatgagcttgatgtgcttttcggaaacttgagagaaatggtt
cagttccaagtggaattcttgaaaacactagaagatggtgtaagattggtatctgacctt
gaaaagcttgaaacagtcaatcagttcaagaaagtcctgttctccttgggtggttcattt
ttgtactatgctgatcgcttcaagctatacagtgcattctgtgccagtcatacaaaggtt
cccaaggtccttgttaaagccaaagttaatccagcttttaaggcctttcttgatgcccag
aatcctaaacagcagcactcatcaacattggagtcctacctgatcaagcctattcagcgt
gttctgaaatatcccctgcttctgaaggagctgatctctcttacagactcagatagtgaa
gaacattatcatctaactgtggcaatgaaagccatgaataaagtagcaagccacataaat
gaaatgcagaaactacatgaagaatatggtgctgtgtttgaccagcttatatctgagcaa
actggagagaagaaagaggttgtggacctttcaatgggagaccttcttctccattccaca
gttacttggctaaatcctcccacatcctttgggaagtgtaagaaagatcctgaattggca
gcatttgtgttcaaaactgcagttgttcttgtgtataaagacggtttcaagcagaaaagg
aaattgggaaacatttctcagagagtatcagtctcagatgatcgagatcctttcaaattt
cgtcatatgattccaactcaagcattgcagattcgatcagttgcaaccacagatgttgag
accgattgtgtctttgaaataattcacacaaaatctgagtcagaaggaagaccagagaca
aactttcacttctgtagcagtactcctgagaacaaacgggatattatcaaggcagttcag
tccatattacgtgataaacatcgaaggcagcttctaaaaactgaaagtttgccacagtct
cagcaatacattccttttgggggaaagcgactatgtgcattgaaaggagcaaggccagta
gtgaatcgagctgtttcagtaccctgcagaagcctaggcaagaagagactatccaggaac
agatttactattgatgcagatgatctgtttggacgtagtcaaagtaatgaatcttcacag
tccccagtgacatgcaatgatactgatcgttgggtggaagaacagtttgatcttggtaag
tatgaagaacaggaagatgtcaaagagactgatattctaagtgatgatgacgaatactgc
cagtcagtaaaaagttcaacactgtcaaaagatttgcaagagcagctgaaagcaatgagc
ttcacaaaagatagtttctgtgagaatggaaaactatccatgcatagaacgccagaaaaa
tcaccatcaaaaacagcatttactgcaaagcaaaaagttgcagcaggagctaatggcgta
gtggaaaataccacagcagaagtaatctgggtaaaacgtgaagacttcatttcaactgag
aaagaaaatgatgaaatctaa
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