Chiloscyllium plagiosum (whitespotted bambooshark): 122556457
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Entry
122556457 CDS
T08871
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04010
MAPK signaling pathway
cpla04020
Calcium signaling pathway
cpla04510
Focal adhesion
cpla04540
Gap junction
cpla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122556457 (pdgfrb)
04020 Calcium signaling pathway
122556457 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122556457 (pdgfrb)
04540 Gap junction
122556457 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122556457 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cpla01001
]
122556457 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cpla04090
]
122556457 (pdgfrb)
Enzymes [BR:
cpla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
122556457 (pdgfrb)
Protein kinases [BR:
cpla01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
122556457 (pdgfrb)
CD molecules [BR:
cpla04090
]
Proteins
122556457 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
VEGFR-1-like_Ig-like
V-set
Motif
Other DBs
NCBI-GeneID:
122556457
NCBI-ProteinID:
XP_043559048
LinkDB
All DBs
Position
14:8578984..8679329
Genome browser
AA seq
1088 aa
AA seq
DB search
MDFPKGKFPTVEIVSSCFPRSYLRTSPFRWSLFIAVYLLTFTFGECSQSHLKPKEIILQP
SSNITLNCSGNGHIHWSYEKVADVYPDGRFLHIRNATIYHNREYTCFNNKTEIMSFYIFV
PDPNMWFLPQRPDDMIIIMESSVSFNIPCLVSNPNLQVTLLHVETNTLVDLPYNNKQGFF
GKFKGGTYVCKATLNGVEQQSESYIVDTYEAPDHLYIELHAARTLVKQGEPISVTCTANT
NLLEYNWNCPRLKEAQITVSDGAQEVNSTLYLESAMLEDSGWYNCSVIGYHTLNQFEEKA
LQITVVTNGFVHLNTNLSAIEYAELSEVKIFVVNITAYPEPTVKWLKDNVPFNEKSNQVT
FTKKSLGKNRYQCALHLIRVKEEDFGNYSIQVWNADSKDEFTFSLRVNVPARILELNDFH
QMNGIQTVTCVTEGLPLPEVTWYTCRDLKRCNNKVGKWNPLKINSSGIQVEKRISELPGN
QVFRVESVLIRKNVDETAAMRCSASNGFGTVSRDVKLISHGIQSQLVTVATILVLLVIIV
ISLVVLVVVWRKKPRYEIRWKVIESISSDGHEYIYVDPMQLPYDSSWEFPRNQLSLGRTL
GSGAFGRVVEAMAHGLGHSNSTMKVAVKMLKTTARTSEKQALMSELKIMSHLGPHLNIVN
LMGACTKGGPIYIITEYCRHGDLVDYLYRNKHTFLQQYADKGQRESNNVITNSYNERMKS
YVALSFENDGGYMDMTKDEKLEYMPMLEAKREPNYADIEHPDYNRPYSQETSSHTEHEVT
ENKLLISESPILTYTDLVGISYQVAQGMEFLSLKNCVHRDLAARNVLICEGKLAKICDFG
LARDIMNDSNYISRGSTFLPLKWMAPESIFNNLYTTLSDVWSYAVLLWEIFTLGGTPYPE
LPVNDQFYNAIRRGYRMPKPQYASDEIYQIMQKCWNDEFEKRPSFSTLVTHMGNQLSEGY
KKKYAQVNQDFLKGDHPAIGRAGAKFFQVNDNVIYSNCTEGLPNGTNNGYIIPLPDPEPH
EVPTDTSSPIENSPSESAAGTRPSSLVCGENGEPADSSDSAPVTEDPKELEVDTEADTTV
LDVEDSFL
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggacttcccaaaaggaaagtttcccaccgtcgagatcgtcagcagctgcttcccacgg
tcatatttgaggacctccccctttcgatggagtctttttattgcagtatacctgctgaca
ttcacatttggtgaatgttctcaaagtcacttgaaaccgaaagagatcattctacaaccg
tcgtccaatatcactctgaattgttccgggaatggccacattcattggagttatgagaaa
gtcgctgatgtctatcctgacggccgttttctgcacatacgtaacgcgaccatttatcac
aacagagagtacacctgcttcaataataaaaccgagataatgagcttttacatctttgtg
ccagatcctaacatgtggttcctcccacaacggccagatgatatgatcatcataatggaa
agctcagtgtcttttaacattccgtgtctggtgtccaatccaaatctccaggtcactcta
ctgcacgtggaaactaacacccttgtagacctgccatacaacaacaagcaaggctttttt
ggcaaattcaaaggtgggacctatgtgtgcaaagctacactaaatggagtggagcaacag
tctgagagttacattgtggacacatatgaagcacctgaccatctttatattgaacttcat
gctgcaagaaccctggtcaaacagggagaacccatcagtgtcacctgtactgcaaatacc
aacttgctggaatataattggaactgcccaaggttgaaggaagctcaaataactgtgtct
gacggggctcaggaagtgaactccaccctctacttggaaagcgccatgctggaagattcc
ggatggtacaactgcagtgtcatagggtaccacactctaaatcaatttgaagagaaggct
ctgcaaattaccgttgtcacaaatggatttgttcatctcaacaccaatctgagtgccatt
gagtatgcagagctgtcagaggtgaaaatatttgtggttaatataactgcctatccagaa
cctactgtcaagtggctgaaagacaacgtaccattcaacgaaaagtccaatcaagtgaca
tttaccaaaaaatctctgggcaaaaacaggtatcagtgcgcactccatctcatccgtgtg
aaggaagaagactttgggaattatagcattcaagtgtggaatgctgacagcaaagatgag
tttaccttctctttaagagtaaatgtgccagctaggatcctggaactcaatgactttcac
caaatgaacggtatccagactgtgacctgtgttactgagggattgcctttaccagaagtc
acctggtatacatgccgtgacctgaaaaggtgcaacaataaggtggggaagtggaatcca
ctgaaaatcaactccagtggaattcaggtggagaagcggatctctgagctgccgggaaac
caggtcttccgtgtagagagtgtcctcatccggaagaatgtggatgaaactgctgcgatg
cgctgctccgccagtaacggctttgggaccgtgagccgggatgtcaagctcatttcccat
ggtatccagtctcagctggtcactgtggccaccatcctggttttgttggtcatcattgtc
atctcattagtggttctggttgtggtttggcggaagaagcctcgctatgaaattcgctgg
aaggtcattgaatccatcagttcggatggacacgagtacatttacgttgacccaatgcaa
cttccatacgattcaagctgggagttccccaggaaccagctttctctgggtcgaacgttg
ggctctggagcctttggcagggtggttgaagcaatggcccatggactcggtcactcaaac
tccaccatgaaagttgctgtaaagatgttgaaaactactgcaaggaccagtgagaaacaa
gccctgatgtcggagctgaaaattatgagtcaccttggcccccatttaaatattgtcaat
ctaatgggagcctgtaccaaaggaggtccaatctacatcattacagagtactgtcgccat
ggcgatctggtggattatctgtacaggaacaaacataccttcctacagcaatacgctgac
aaagggcagagagagtcaaacaatgtcatcacaaactcctacaacgagaggatgaagagt
tatgtggccctgtcgtttgagaatgatggagggtacatggacatgactaaagatgagaag
cttgagtacatgccaatgctggaggctaaacgtgaaccaaactacgctgatatcgagcac
cccgactacaacaggccatactcacaggagacaagctcccacactgagcatgaggtcaca
gagaataagctactgatcagcgagtctccgattctgacctacacggatcttgttggaatc
agttatcaggtggcacaaggaatggaattcctttcgttgaaaaattgtgtccatcgggat
ttggctgcaaggaatgtactgatctgtgaaggaaaactcgcaaaaatctgtgactttgga
ttagcacgagacataatgaatgattccaattatatttcaagaggcagtacctttttgcct
ctgaaatggatggcaccggagagcattttcaacaacctatacaccacactgagcgatgtc
tggtcctacgcagtcctgctctgggagatcttcaccctcggtgggacaccgtatccagag
cttccagtcaatgaccaattctacaatgccattaggcgtgggtacagaatgcccaaacct
cagtacgcctcagatgaaatatatcaaatcatgcaaaagtgttggaatgatgagtttgag
aaaagaccttcattttcaactttagtaacccacatgggaaaccagctcagtgagggttac
aagaagaaatatgcccaggttaatcaggactttctgaagggtgatcacccagccataggt
cgcgccggggctaagttcttccaagttaacgacaacgtgatctactccaactgtactgag
gggctgcccaatggcaccaataacggctacatcatcccattgccggaccctgagccccat
gaggtgcctacagacactagcagtccaatagagaactctccgagtgagtctgctgcagga
acaaggccaagttcccttgtgtgtggagagaatggagagccggctgactccagtgattct
gctccggtgactgaagaccctaaggagcttgaggtggacactgaagctgacactactgtg
ctggacgttgaggacagtttcctgtga
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