KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122556577
Entry
122556577         CDS       T08871                                 
Name
(RefSeq) rap guanine nucleotide exchange factor 6-like isoform X1
  KO
K08020  Rap guanine nucleotide exchange factor 6
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04517  IgSF CAM signaling
cpla04530  Tight junction
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    122556577
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    122556577
SSDB
Motif
Pfam: RasGEF RasGEF_N PDZ RA PDZ_6 cNMP_binding RA_2 PDZ_2
Other DBs
NCBI-GeneID: 122556577
NCBI-ProteinID: XP_043559345
LinkDB
Position
14:27055130..27430330
AA seq 1651 aa
MTSYVDQLFKQVLMKKPSERNQQDLEIIYSHLHGMDVLSNLREHQLRLMCTMVRYEKHDA
NEVLFYPDSVATCWYILLSGSVFIKESMFLPRCSFGKQTAGSLRRGCECIVLETSEMIVV
ENVSENEEKNLQREVTNRQSRRRFRKINLKGERQTITDNVDSYHPDRPHQTNTYHMLPAD
LSKMHLTDNPHPQVTHVPSSQSGCSIASDSGSSSLSDIYQATESEMGDVDLSGLPETAVD
SEEEEEDEEDIDRASDPLMGRDVVRECLEKDPADRTDDDIEQLLEFMHQLPAFANMTMFV
RRELCSVMIFEVVEHAGAIITDDGKELESWYVILNGSVEITDSHGRSEILCMGNSFGISP
SLEKQYMKGTVRTKADDCQFVSIAQQDYCRILNQVERNTHKVEEEGEIVMVKEHRELDRS
GTRKGHIVIKGTPDRLIRHLVEEHSIVDPTYIEDFLLTCRTFLSSPMEVGEKLLEWFKID
SLRDKVTRVVLLWVNNHFNDFEGDPAMTNFLEEFENKLETAKMKGHLRLLNIACAAKAKW
RQITLLKPSRESPLYFTLLGGSERGFGIFVESVETGSKAAEAGIKRGDQIMEVNGQNFEN
IQFTKAQDILRNNTHLSITVKTNIFVFKELLNRLIQEKKNGAPHIPKIAEKKGNRYSHPD
LHRDVEQMFPSEKSNKKMKANTVSGGRNKIRKILDKTRFSILPPKPFSDAGVSQSQDDSI
VGTRQFRHSVAVMPFTGTLSSSSPDLLQPATSLLDFTNPTDIPDQVIRVFKADQQSCYII
ISKDTTAKEVVAHSVHEFGLTAPPETYSLCEVSISPEGVIKQRRLPDQLSKLADRIQLNG
RYYLKNNMETETLCSDEDAQELLRESQISLLQLSTIEVATQLSMRDFELFRNIEPTEYID
DLFKRESKTGNVHLKQFEDIINQETFWVATEILKETVQWKRVKIIKHFIKIALHCRECKN
FNSMFAIISGLNLAPVARLRSTWEKLPSKYEKLLRDLQDLFDPSRNMAKYRNVLSSQSLQ
PPIIPLFPVVKKDLTFLHEGNDSKVEGLANFEKLRMIAKEIRHVVRMTSVNMDPAVMFRN
RKKRWRSLGSLSQGSTNSNMLDSVQGGGHKKRVRRSSLLNAKKLYEDAQMARKVKQYLSN
LHVEIDEEKIQIMSLQCEPAYSTLSKTFGERRSYKSSDMSPMTMRSCGQPGKHQSQQRMS
QALQVPSLYPSRKKVSAASFGTNSPQSSKKSLVVSEEVQADRSKKNTEDTVSTTSSQLSS
PPVSPQSSPRKAFALAPITRIDNFSDSSHSEISSRSSIVSNCSGDSMCAAIQDERCLPPS
LSVPDTVEATGGRNVHPAARSVQPNTSSSVILSTEKRGCLVMDSAVTSSSNEELAREHND
HTSIDAADSGRGSWTSCSSISHDSFQTIQNQKSWDLLNTSKYTHTLDGPIAEIELTQSWT
TGCHLNSGDLTKNTCPIQSKDTIECVHSRESWTPSTNSHLGKFEMDCGTAKRIDLHETTV
EASGRNANVSNSKSNTDPSYKAVTSSTEKGLIVYCVTAAQRDGRYREPPPTPPGYVGIPI
ADVKEGGHHYPRLKPPDYNVALQRSRMITQTCDPTRLLSVPIANQPTSSNQSKALGLPHW
HKISDSNRLVQLNHQDLQDNEDDENEQVSAV
NT seq 4956 nt   +upstreamnt  +downstreamnt
atgacttcctacgtggaccagcttttcaaacaggtcttgatgaagaagccttcggaaaga
aaccagcaggatttagaaattatatattctcacctccatggcatggatgtgctgtctaat
ttgagggaacatcagctcagattgatgtgcacaatggtacgttatgaaaagcatgatgcc
aatgaggtcttattttaccctgacagtgttgcaacttgctggtatatcctactttcagga
tcggtatttatcaaagaatcaatgtttctgccacgttgcagttttggcaagcagactgca
ggaagcttaagacgaggctgtgaatgtatcgttttagagacttcagaaatgattgtggtt
gaaaatgtcagtgagaatgaggagaaaaatctacagagggaagtcaccaacaggcagtct
cgtcggcgcttcaggaagatcaacttgaaaggagagcggcaaacaatcacagacaatgtg
gattcctatcaccctgacagacctcatcagactaacacttatcacatgcttcctgcagat
ctttccaagatgcacctcacagacaatccacatccacaggtgacacatgtcccttccagc
cagtccgggtgcagtattgccagtgactctgggagcagcagcctgtcggatatctatcag
gctacggagagcgaaatgggggatgtagatctttcgggtcttcctgaaacagctgtagat
tctgaagaagaggaagaagacgaagaagatattgatcgagcatctgatccactgatgggc
agggatgttgttagggagtgtctggagaaggatccagcagacagaactgacgatgatatt
gaacaattgctggagtttatgcatcagctccctgcctttgcgaacatgactatgtttgtc
agacgtgaactgtgctcagtcatgatctttgaagtagtagaacatgcaggagcaataata
actgatgatggaaaagagctagagtcgtggtatgttattctaaatggctcagtggaaatc
accgattctcatggaagaagtgaaatactttgtatgggaaatagtttcggtatctctccc
tctttggagaaacaatatatgaaaggaactgttaggacgaaagcagatgattgtcagttc
gtaagcatagctcagcaggactactgccgcattctgaatcaagtagagaggaacactcac
aaagttgaggaggaaggggagatagtaatggtgaaagaacacagagagctggaccgtagt
ggaacaaggaaaggacacattgtaataaagggaacaccagacagactcattagacatcta
gttgaagaacattccattgtggatcccacatacatagaagatttcttattaacatgtaga
acatttctgtcaagccccatggaggttggagagaaattactggagtggtttaagattgat
agccttcgggacaaggtcacgcgagttgtgctcttgtgggtgaacaatcacttcaatgat
tttgaaggagatcctgccatgaccaattttctagaggaatttgaaaataagttggaaact
gcaaaaatgaaaggacatctcaggttgttgaatattgcatgtgctgctaaagccaaatgg
aggcagataactttgctaaagccttcaagagagtccccattgtacttcactttgcttggt
ggcagtgagagaggatttggtatttttgtggaaagtgtggagacaggcagtaaagctgct
gaggctggtattaagcgaggcgaccagattatggaagtaaatggacagaactttgagaat
atccagttcacaaaagctcaagatattttgagaaataatacacatttgtctatcactgtg
aagaccaacatttttgtttttaaggagttgttaaatagactaattcaggagaaaaaaaac
ggggctcctcacattcctaaaattgcagaaaaaaaggggaatcgttactcgcatccagat
ttgcacagagatgtggagcaaatgtttccttctgagaaaagtaacaagaagatgaaagcc
aacacagtatcaggtggtcgcaacaaaattcggaaaatacttgacaagacacgtttcagc
atcttgccaccaaaaccattcagtgatgctggtgtgagccagtcgcaggatgacagcatc
gttggaacaaggcagtttaggcacagtgttgctgtaatgcctttcactggaacgctttcc
tcgagtagtcctgacctgttgcaacctgctactagtttgcttgatttcacgaatcctaca
gacataccagatcaagtcattcgagtctttaaagcagaccaacaaagttgttacatcatc
atcagcaaagatacaactgcaaaagaagttgttgcccactccgttcatgaatttggactg
actgcgccacctgaaacttattcactctgtgaggtttctataagccctgaaggtgtcatc
aagcaaaggagattacctgatcaattatccaaacttgctgaccgaatccagctgaacggc
aggtactatctgaagaataatatggaaacagaaactctttgctcagatgaagatgcccag
gaattattaagggaaagccaaatatctctgctgcaactcagcaccattgaagtagcaact
cagctctcaatgcgtgactttgaattattccgtaacattgaacccactgaatatatagat
gacctgttcaaaagagagtcgaaaacaggaaatgtacatcttaagcagtttgaggatatt
atcaatcaggagacattctgggtcgcaactgagattttgaaggaaactgttcagtggaaa
agggtaaagataattaaacatttcatcaaaattgccctacactgcagagaatgcaagaac
ttcaattctatgtttgcaattatcagtgggctaaatcttgcaccagttgcacgtctgaga
agcacttgggaaaaactgccaagcaaatatgagaagttacttcgggaccttcaagatctc
tttgacccttcaaggaacatggcaaaatatagaaacgttctcagtagccagagtctgcag
ccacccatcattccactgttcccagtggtcaaaaaagatctcactttcctgcacgaagga
aatgattccaaagttgaaggtttagcaaactttgaaaaactacggatgattgccaaggag
attcgacatgttgtccgtatgacttctgtaaacatggatcctgctgtaatgttcagaaat
aggaagaagagatggaggagtttggggtcattaagtcaaggcagcacaaattccaacatg
ctagactcagtgcaaggtgggggccacaagaagcgagtgcgccggagctctctgctcaat
gccaagaagctgtacgaggatgcccagatggctcggaaggtgaagcagtatctctcaaac
ttacatgttgagattgatgaagagaaaatccaaatcatgtcactgcagtgtgagcctgcc
tacagcacattaagcaagacttttggtgaaaggcggtcatataaaagctcagatatgtca
ccaatgacaatgaggtcatgtggtcaaccaggaaaacaccaatcacaacagcgaatgagc
caagccttgcaagtaccatctttgtatccatcgcggaagaaagtatcagctgcatcattt
ggcactaattctcctcagtcctcgaagaagtctctagttgtgtctgaggaagtgcaagca
gacagaagcaagaagaacactgaagatacagtatcaacaacatcatctcaactttcttct
cctcctgtatctcctcagagctctccccgcaaagcttttgctctggctcctattacaaga
attgacaatttctcggactcgagtcacagtgaaatttcatcgcgatccagcattgtcagc
aattgttctggtgactccatgtgtgcagctatacaggatgagagatgtttgccaccatct
ctcagtgtcccagataccgtggaagcaactggggggagaaatgtgcatccagcggctaga
tctgtacaacctaatacaagttcttctgtaattttaagtactgaaaagcgagggtgcctg
gttatggattcagcagttacatcttcaagtaatgaagagttggcccgcgaacacaatgat
cacacctcaattgatgcagcggacagtggccgtggaagctggacttcctgctccagcatc
tcccatgacagcttccagacaatccaaaatcagaaaagttgggacctactaaatacatct
aaatatactcatactttagatggaccaattgcagaaattgaattgacacaatcttggacc
acaggctgtcacttaaactctggagacctgactaaaaatacttgtccgattcagtctaaa
gacaccattgaatgtgttcattccagggaaagctggacaccttcaacaaattctcatttg
ggcaagtttgaaatggattgtgggactgcaaaacgaatagacttgcacgagactacagtt
gaagcatctgggcgcaatgcaaatgtttcaaactctaagtcaaacactgacccctcttac
aaagctgttacttcaagcacagaaaagggtcttattgtgtattgtgttactgcagcacaa
agggatggtaggtatagagagccaccacccactcctccgggatacgtgggaattccaata
gcagatgttaaggaaggaggacatcattatccacgcttaaaacctccagactataatgtg
gcattgcagaggtcacgaatgataacacagacatgtgacccaactagactgctctcggtt
cccattgctaaccaaccaacatcaagcaaccagtcaaaagctctgggcctacctcactgg
cacaaaatctccgactccaaccgactagtacagcttaaccatcaggatcttcaagataat
gaagatgatgaaaatgagcaagtttctgcagtttga

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