Chiloscyllium plagiosum (whitespotted bambooshark): 122557310
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Entry
122557310 CDS
T08871
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04120
Ubiquitin mediated proteolysis
cpla04210
Apoptosis
cpla04217
Necroptosis
cpla04510
Focal adhesion
cpla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122557310
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
122557310
04217 Necroptosis
122557310
09144 Cellular community - eukaryotes
04510 Focal adhesion
122557310
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122557310
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpla01002
]
122557310
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122557310
03029 Mitochondrial biogenesis [BR:
cpla03029
]
122557310
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122557310
Peptidases and inhibitors [BR:
cpla01002
]
Peptidase inhibitors
Family I32: IAP family
122557310
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122557310
Mitochondrial biogenesis [BR:
cpla03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122557310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
UBA_BIRC2-3
zf-C3HC4_3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
122557310
NCBI-ProteinID:
XP_043560807
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All DBs
Position
15:51530649..51564359
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AA seq
502 aa
AA seq
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MDITTDCKQDLSNEIYRLGTFINFPSDSPVSEATLARAGFFYTGIKDQVRCFSCNGAVDN
WQHGDSAVRKHRQLFPACPFINGSSLNEQTASSSFSGTSHDPANSDQAVATSPHASENGP
CNHLNVVHQYCNQVLSNPVKSKSIEDLSHLRPKNPAMCSEEARLSTFAKWPSYAIVTPKD
LAKAGLYYTCKDDQVQCFCCGGLMKNWEPGDRAMTEHKRHFPMCAFVSGRFIGNIPIDPN
CSETTAADQSVNEPKANAFHLPKHPDKQTLDSRLQTFKCQVHFPLNIADLARAGFYSTGE
DDNVKCFHCDGGLRNWESSDEAWEQHAKWFPGCAFLIEQKGRDFVNDVQLRKLYSNSTTE
TLPQDDLSTHVPETESYLNQSPVVQGALEMGFDKSLIIQLMKKKLQSTGDTYKSVEMLVT
DILAVERDAPEKEHEDQQAETSVEEQLRKLKEEKCCKICWDRDVCIAFVPCGHIVTCKEC
SAVQKCPICCAQIRDRVRIYLS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggatattacaactgattgtaaacaagatctctcaaatgaaatctatcggcttggaaca
tttatcaactttccatctgattccccagtatcagaagcaacattagccagagcaggtttc
ttctacacgggtatcaaagaccaggttaggtgtttcagctgtaatggtgcagtagacaac
tggcaacatggagattctgctgtacgaaaacacaggcagctatttccagcttgtccattt
attaatggttcaagcctgaatgaacaaactgcaagctccagtttttcaggcacatctcat
gaccctgcaaattccgatcaagcagttgcaactagtcctcatgcttcagaaaatggccct
tgcaaccatttgaatgttgtccaccaatattgtaatcaagttctcagcaatcctgtgaaa
agtaagagtattgaagacctgtcccatctacgacccaaaaatcctgcaatgtgcagtgaa
gaagccagactttctacctttgccaaatggcctagttatgcaattgtaacaccaaaagac
cttgctaaagcaggactttattacacgtgcaaagatgatcaagtacagtgcttttgttgt
ggtgggttaatgaaaaactgggaacctggagatcgagcaatgactgaacacaagagacat
ttccccatgtgtgcgtttgtttcagggcgttttattggaaatataccaattgatccaaat
tgcagtgaaacaacagctgctgatcagtctgtaaatgaacctaaagcaaatgcttttcac
ttacctaaacatccagacaagcagacattagattcacgccttcaaaccttcaaatgtcaa
gtgcattttccacttaatattgctgaccttgcaagagctggattttacagtacaggcgaa
gacgacaatgttaagtgttttcactgtgatggaggcctgaggaattgggagtcttctgat
gaagcttgggagcaacatgcaaaatggttcccagggtgtgctttcctgatagaacagaaa
ggccgtgactttgtcaatgacgttcagttgaggaaattgtactccaactcgacaactgaa
actttgcctcaagatgacctttctacacatgtaccagaaactgagagctacttgaatcaa
tctcctgtagttcagggtgctcttgagatgggatttgacaaatctctaattatacaactc
atgaaaaagaaactgcaatcaactggtgatacctataagtctgttgaaatgttggttaca
gatattctggcagttgaaagagatgcaccagaaaaggaacatgaggatcagcaggcagaa
acaagtgtggaggagcagttgagaaaactgaaggaagagaagtgttgcaagatttgctgg
gatcgagatgtttgcattgcctttgtaccctgtggtcatatagtcacatgtaaggaatgt
tctgctgtgcagaaatgtcctatatgctgcgctcaaattcgtgacagagttagaatatac
ttgtcttaa
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