Chiloscyllium plagiosum (whitespotted bambooshark): 122557341
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Entry
122557341 CDS
T08871
Name
(RefSeq) short transient receptor potential channel 5-like isoform X1
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpla01009
]
122557341
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122557341
Protein phosphatases and associated proteins [BR:
cpla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122557341
Ion channels [BR:
cpla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122557341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
122557341
NCBI-ProteinID:
XP_043560881
LinkDB
All DBs
Position
15:55999785..56100962
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AA seq
991 aa
AA seq
DB search
MAQLYYKKVNYSPYIDRIPLQIVRAENELSLEEKAYLNAVEKGDYASVKQALEEAEIYFN
ININCTDPLGRSALLIAIENENLEIMELLLSFSIYVGDALLYAIRKEVVGAVELLLHYRK
PSGEKQVPPLLMDAQFSEFTPDITPIMLAAHTNNYEIIKLLVHGGVSIPRPHQVRCNCVE
CVSSSEVDSLRHSRSRLNIYRALASPSLIALSSEDPILTAFQLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDQSDELDPQKCHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRRHWAVKLLTCITIGFLFPVLSVVYLVAPKSRLGLFI
RNPFIKFICHTGSYLTFLFLLLLASQHIVKTDLHMQGPPPTIVEWMILPWVLGFIWAEIK
EMWDGGFTEYVHDWWNLMDFAMNSLYLATITLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETSASEEPNHCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGATLPPP
FNIIPSPKSVWYLCKWLHMHICPSRDSENEQKRENLREFTERHADDLIQNQHYQEVIKNL
VKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRKSSRRTYSTSSDGMQM
GDMEDDSAEEMKKIVSFNLAGESNDRKTLKMNSFSVSALIKSVSGIDLNEEKSKNNRMSK
QSSSVRNGNRFQRYPNSKKDSFKRLGLLFSKMNGQLSEPSPEPVSSISDGLLQAQNVWQD
FNYSQISNSNNITKSESSLNAVGLNEVNRRNRIDSHCSANHDSFNCSSNISTSNNKLIDS
SSDVYDSWGEACDLLMTRWNSHQEDYVTTQL
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctgtactacaaaaaggtcaactattctccatacatagaccggattccattg
cagattgtacgtgcagagaatgagctttcgctggaggagaaagcttatctgaatgcggtg
gaaaagggggactatgccagtgtgaagcaagctctggaggaagctgaaatctactttaat
attaatatcaactgcacagaccctctgggacggagtgcactcctcatagcaattgaaaat
gaaaacttagagatcatggagctgctcctgagtttcagcatttacgtgggggatgcattg
ctctatgcaatacgaaaggaagttgttggagcagttgagcttctgctgcattataggaaa
ccaagtggagaaaaacaggtccctcctttattgatggatgcccagttttcagaattcact
ccagacattacacccataatgcttgctgcacataccaataactatgagattattaaacta
ttggtccacggaggagtctccattcctcgacctcaccaagtccggtgcaactgcgtggag
tgtgtttctagttcagaagttgacagtctccgtcactcaaggtcacgcctgaatatatac
cgtgctcttgctagtccttcgttaatagccttgtcaagtgaagacccaatcctcacagct
tttcagctaggatgggaactgaaagaactcagcaaagtagagaatgagtttaaagctgaa
tatgaagagctgtcacagcagtgcaaactctttgccaaagatctgctggatcaagctcga
agttcgagggagctggagatcatattgaaccacagagatgaccagagcgatgagttagat
ccccagaaatgccatgacctagcaaaactgaaggtagccatcaaataccatcagaaagag
ttcgttgctcagcctaactgccagcagttacttgcgacattgtggtacgatggattccca
ggctggcgccgccgacactgggcagtcaaactcctaacctgcatcaccattgggtttcta
tttccagtactttctgtggtttatctggtggcgccaaagagcagactgggactcttcatt
aggaaccctttcattaagtttatctgccacacaggctcctacctgacattccttttcctg
ctattgttggcatctcagcacattgtcaagaccgaccttcacatgcaagggccaccacca
actattgtcgagtggatgatattaccatgggtattaggctttatatgggctgaaatcaaa
gaaatgtgggatggtgggtttactgaatatgtacatgactggtggaacctgatggacttt
gcaatgaattccttatacttagccactatcacattgaagattgttgcctatgtgaagtac
aatggctcacgccctcgtgaagagtgggagatgtggcacccaacattgattgcagaagcc
ctgtttgcaatagccaatattttcagctcccttcgtctgatctcccttttcactgcaaac
tctcacctgggaccattacaaatctcactgggccgcatgctccttgatattctcaagttc
ctcttcatttattgcctggtgctgcttgcatttgcaaatggactgaatcaactgtacttt
tactatgagaccagcgcttctgaagagcccaatcattgcaaaggaatacggtgtgagaag
caaaacaatgcattttcaacattatttgaaacactgcaatccttattctggtcagtattt
ggtctgttgaatttgtacgtcactaatgtaaaagctcggcatgagttcacggaatttgtt
ggagccaccatgtttggaacctacaatgtcatctccttggttgtcttgcttaatatgctg
attgccatgatgaataattcttaccagctcattgcagaccatgctgacattgagtggaag
tttgccagaacaaagctttggatgagttactttgatgaaggtgcaactcttccaccacct
ttcaacatcatccccagcccaaaatctgtttggtacctctgtaaatggctacacatgcac
atctgtccaagcagagattcagagaacgagcaaaagcgtgagaatctcagagaatttaca
gaacggcatgcagatgacctgatccaaaatcaacactaccaggaagtcattaaaaattta
gtgaaaagatatgttgcggctatgatcagaagtgccaaaactgatgaaggacttacagaa
gagaactttaaggaactgaaacaagatatctccagttttcgctatgaagttcttgacctg
ttaggaaacaggaaatcatcgcgaaggacatactctaccagcagtgatgggatgcagatg
ggagatatggaggatgatagtgctgaagaaatgaaaaaaatcgtgtcattcaatttggca
ggtgaaagtaatgacagaaagacgttgaaaatgaactctttcagtgtttcagctcttatt
aaatcagtttctggaattgaccttaatgaagagaaatccaaaaataacaggatgagtaag
caatcttcctcagtcagaaatggcaatcgattccagagatatccaaattcgaagaaggat
tcatttaaaagacttggccttttgttcagcaagatgaatgggcaactatctgaaccaagc
ccagagccagtgtcaagcatttctgatggactacttcaagcacaaaatgtgtggcaggac
ttcaattattcccaaatttccaattctaacaatataacaaagagtgagagcagccttaat
gctgttggtcttaatgaagtaaacagaagaaacagaattgatagccattgttcagctaac
catgattcctttaattgttcttccaatatcagtacctccaataacaaactcattgactcg
tcaagtgacgtctatgactcctggggggaagcctgtgacttgctaatgaccagatggaac
agtcatcaagaggactatgtaacgactcaattataa
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