Chiloscyllium plagiosum (whitespotted bambooshark): 122558086
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Entry
122558086 CDS
T08871
Symbol
lrrc56
Name
(RefSeq) leucine-rich repeat-containing protein 56
KO
K25425
leucine-rich repeat-containing protein 56
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpla03037
]
122558086 (lrrc56)
04812 Cytoskeleton proteins [BR:
cpla04812
]
122558086 (lrrc56)
Cilium and associated proteins [BR:
cpla03037
]
Motile cilia and associated proteins
Dynein assembly factors
122558086 (lrrc56)
Cytoskeleton proteins [BR:
cpla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Dynein-related proteins
122558086 (lrrc56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
LRR_8
LRR_9
LRR_6
LRR_LRWD1
LRR_14
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
122558086
NCBI-ProteinID:
XP_043562341
LinkDB
All DBs
Position
16:31196250..31322448
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AA seq
602 aa
AA seq
DB search
MAAEGIAANSGKEMEIFRIGDVERFQRLRNLDERALTKTEDLRQVKVLEMCVDTQDNSLG
NFGTHLPSLVQLKLNSSFIASVRDLGTSLTKLQVLWMARCGLKDLDGIPSFCSLKELYVA
YNSISDVSPVSMLEHLEVLDLEGNNIDDIVQIHYVALCSKLNTLTLEGNPFCSRQNPGIP
EDSNSNYRETVKKLIPHLKYLDDIPVSETCIQSNCTINKDWLIVKEAIKDGISAEDLENL
DDSITIGRPASRKHQSCTSQKLSVSQRPHSAGRLSTGSSVGILRTGIPDSRLYDDASDLT
HGASSIFCGNPVTALRARRKKQGVSSDRAGNWFSPYTHLPEHTYDSLEIDSRTRDDIFAE
LRAWRNEHSRRLEAILKEQEPQVLKIDHNDNDVLSIHSGDEEKKDNCCDEWTGSVSQETA
CLSPLVTSSPNFSSDMESLLVADFNRTLSPVPPSPQEVSARSQKVLDFRVRRLRRSVQVK
SESLQERNEDSAVFDEDKEAVYSHEVKSRSKLEDRMSTYAAIKSLRPVSGPATVGLRSVK
PSVDKRPQKIIDSHQPIIRSSTKTPERPLSLNPMRPLTAKAALQRLPNRPLLLPSRGNKT
TS
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaaggcatagctgcaaatagtggaaaagaaatggaaatttttagaattgga
gatgttgaaagatttcaaaggcttcgaaatttggatgagcgagccctgaccaaaacagag
gacctacgacaggtgaaagttctggagatgtgcgtagacacacaggataacagtcttgga
aattttggtactcatttgcccagtttggttcaactgaagctgaatagcagtttcatcgca
tcggtaagggatcttgggacatcattaacaaaactgcaggtgctctggatggctcgctgt
ggccttaaagacttggatggaattccttccttctgttcattaaaggaactatatgtggca
tataacagtatttcagatgtcagcccggtgagcatgttggaacaccttgaagtactagac
ctggaagggaacaacattgatgatattgtacaaatccactatgtagctctgtgcagcaag
ctgaacacactcacactggaggggaacccattttgctcacgacaaaatccagggatccct
gaggattcaaattctaactacagggagacggttaaaaagttaatcccacacttgaagtat
ttggacgacattcctgtgagtgagacctgcattcagtctaactgtaccatcaataaggat
tggcttattgtgaaggaagccattaaggatggcatctcagctgaggaccttgaaaattta
gatgacagtattaccattgggagaccagcttcacgaaagcaccaaagttgtacatctcaa
aagttgtcagtttctcagaggcctcacagcgctggaagactctccacaggatcttctgtt
ggcatcttacgaacaggaattcctgatagcaggctttatgatgatgcaagtgacctaaca
catggtgccagcagcatattttgtggaaatcctgtcacagctcttcgagcccggaggaag
aagcaaggtgtatcaagtgatagagcagggaactggtttagtccgtatacacacttgcca
gaacatacctatgattcactagaaatcgatagcagaacccgagatgatatttttgcggag
ctgagagcttggcggaacgaacacagtaggcgccttgaagctattttgaaggaacaagaa
ccacaagtgttgaagattgatcataatgataatgatgtcctgagcattcattcaggtgat
gaggagaagaaggataactgctgtgatgaatggactggctctgtttcacaagaaactgca
tgcttgtcgcctttagtcacttcatccccaaatttttcttccgatatggaaagcttgcta
gttgcagactttaatcgaacgttgtctcccgttcctccttcccctcaagaagtatctgca
agatcacagaaagtacttgactttagggttagacgtttaagaaggtctgtccaggtcaaa
agtgaatcattgcaagaaagaaatgaggactctgctgtgtttgatgaagacaaagaagct
gtatattcacatgaagttaaatcaagaagtaagcttgaagacaggatgtctacatacgct
gcgatcaagagcctaagaccagtttctggaccagctacagtcggattaagaagtgtgaag
ccaagtgttgataaaaggcctcaaaaaattattgacagtcatcagccaataattcgttca
tctacaaaaacacctgaaaggcctctctccctgaaccctatgcgacctctgactgctaag
gccgcactgcagcgattgccaaacagaccattgcttctgcccagcagaggaaacaagaca
acaagctga
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