Chiloscyllium plagiosum (whitespotted bambooshark): 122558311
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Entry
122558311 CDS
T08871
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00052
Galactose metabolism
cpla00510
N-Glycan biosynthesis
cpla00513
Various types of N-glycan biosynthesis
cpla00514
Other types of O-glycan biosynthesis
cpla00515
Mannose type O-glycan biosynthesis
cpla00533
Glycosaminoglycan biosynthesis - keratan sulfate
cpla00601
Glycosphingolipid biosynthesis - lacto and neolacto series
cpla01100
Metabolic pathways
Module
cpla_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
cpla_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
122558311
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
122558311
00513 Various types of N-glycan biosynthesis
122558311
00515 Mannose type O-glycan biosynthesis
122558311
00514 Other types of O-glycan biosynthesis
122558311
00533 Glycosaminoglycan biosynthesis - keratan sulfate
122558311
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
122558311
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cpla01003
]
122558311
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122558311
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122558311
Enzymes [BR:
cpla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
122558311
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
122558311
2.4.1.90 N-acetyllactosamine synthase
122558311
Glycosyltransferases [BR:
cpla01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
122558311
Membrane trafficking [BR:
cpla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
122558311
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of breast milk
122558311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
122558311
NCBI-ProteinID:
XP_043562674
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All DBs
Position
2:complement(144051666..144097471)
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AA seq
469 aa
AA seq
DB search
MTYCSWKLPLARSPAYSVLIGSPVDTPPPGRTRPLIGLPLPGRTWPLIGRPSRCPSLIGV
SRRPRPAPAAPVGRSGSSVRLCRSLAAGPLGGWRKPLVHGPRVSRAMALSSAMPARGLHA
TCLVVMVLSGVHLAVTLLYYLDMHVYSGRMVRRFGSFLVEDGAGTAEGPLANSTNSSYSV
EYHTPRSPPPSPLQPCPDTPPHLVGPLSIEFSQTVDLEDVKNTNSLLREGGRFTPVECTA
LQKVAIIIPFRNRFEHLKYWLYFLHPILQRQQLDYGVYVINQHGEDTFNRAKLLNVGFME
ALKEYDYNCFVFSDVDLIPMDDRNIYRCYSQPRHLAVSMDKFGFRLPYHQYFGGISALSR
EQHEKINGFPNDYWGWGGEDDDIYNRIIFKGMRISRPNGGIGKCRMIKHNRDRNNAPNPQ
RFNRISKTRQTMQHDGLNSLKYTVLEVKKYPLYTFIDVDVGGPGRQPSG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacatattgttcatggaaactacctctggcccgctcaccagcgtactcggttctgatt
ggttccccggtggacacgccccctcccgggagaacgcggcctctgattggtttgccctta
cccgggcggacatggcctctgatcggtcgaccctcgcgatgcccatcgctgattggtgtg
agccgtcggccccgccccgcccccgccgcgccggttggtcggagtggaagctccgtgcgg
ctgtgtcggagtctcgcggcgggtccccttggcgggtggcgaaagccgctggtgcacggc
ccccgggtgtcgcgagccatggcgctgagctcggcgatgccggcccgcgggctgcacgcg
acctgcctggtggtgatggtgctgtccggggtgcacctggccgtgactctgctctactac
ctggacatgcacgtctacagcgggcggatggtgcggcgcttcggcagcttcctggtggag
gacggggccggcaccgcggagggcccactcgccaacagcaccaacagcagctacagcgtc
gagtaccacactccccggagtccgccgccatcgccgttacagccgtgcccggataccccg
ccgcatctcgtgggaccactttcaatagaattttctcagactgttgatctggaagatgtg
aaaaatactaattcattgttaagggaaggaggcagatttactccagtcgagtgtacagct
ctccagaaagttgccatcatcattccttttcgtaatcgatttgagcatttgaaatattgg
ttgtatttcttgcatccaattcttcagcggcagcaactggattatggggtgtatgtcatt
aaccagcatggtgaagacacttttaatcgtgccaaacttctcaacgtaggttttatggaa
gctttgaaagaatacgactacaactgctttgtattcagtgatgtcgatttgattcccatg
gatgatcgaaatatatacagatgttacagccaaccaaggcatctggctgtatcaatggat
aaatttggttttaggttaccctatcatcagtactttggaggaatatcagctttaagtaga
gaacagcatgaaaaaattaatgggttcccaaatgattactggggctggggaggagaagat
gatgacatctacaacaggataattttcaaaggcatgaggatttcacgtccaaatggcggc
atcgggaaatgccgtatgatcaaacataacagagatagaaataatgcacctaaccctcag
aggtttaacagaatttctaaaacaagacagacaatgcagcatgatggtttaaattcactc
aagtatacagtgttagaggtcaagaaatatcctttatacacctttattgatgtggatgtc
ggtgggcctggaagacaaccttcaggataa
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