Chiloscyllium plagiosum (whitespotted bambooshark): 122558436
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Entry
122558436 CDS
T08871
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
122558436 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpla01002
]
122558436 (mmp2)
Enzymes [BR:
cpla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
122558436 (mmp2)
Peptidases and inhibitors [BR:
cpla01002
]
Metallo peptidases
Family M10
122558436 (mmp2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
DUF4953
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
122558436
NCBI-ProteinID:
XP_043562947
LinkDB
All DBs
Position
17:48530906..48561630
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AA seq
657 aa
AA seq
DB search
MTMKTTSNFYRLVLKVTLLQIIWVQQTLEAPTGIVKFPGDNSTKTDKEIAALYLNKFYGC
PKERCDLVVLSDTLKKMQKFFGLPQTGELDSETVNVMKKPRCGVPDVANYNFFPQMPKWE
NKQITYRILGYTYDLDSETVDDAFARAFQVWAAVTPLKFSRIFDGEADIMINFGRWEHGD
GYPFDGKDGLLAHAFAPATGIGGDSHFDDDEFWTLGEGRVVKTRFGNAEGEFCKFPFLFN
GKEYHSCTTEGRSDGFPWCSTTYNFDADAKYGFCPHELLFTMGGNAGGEPCSFPFTFENR
QYDSCTTEGRSDGYRWCSTTSNYDTDRKYGFCPDQAMSTIGGNSDGSPCVFPFTFLRKTY
DSCTSSGRNDGLLWCSTTGNYDVDSKWGFCPDSGYSLFLVAAHEFGHALGLEHSQDPGAL
MAPIYTYTKNFRLSNDDILGIQKLYGAPTDKPLPPTQGPVTPMNLCEETLIFDGITHIRG
EIFFFKDRFLWRTRNPRSKPLGPMLVATYWTDLPEKIDAAYQEPLTDKAVFFAGDQHWLY
TASDLESGYPKKISTLGLPDDLPHIDAVFNWKKNKKTYIFAGDKFWRYNEVKKKMDPGFP
KLIADAWNGIPDNLDGALESLENGHTYFFKDWYYLQMEDQSLKIIKVGNVKTDWLGC
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgactatgaaaacaaccagcaacttttatcgcttagtcttaaaagtaaccttgctccaa
atcatctgggtccagcagactttagaagcaccgactggcatagtcaagtttccaggtgat
aacagcacgaagacagacaaggaaatagccgctttatacttgaataaattctacggatgc
cctaaagaaaggtgtgatcttgtggtgctgtcagacacactgaagaagatgcagaaattt
tttggattgccacagactggagaactggacagtgagacagtaaatgtgatgaagaaacca
cgatgtggagttcctgatgtagccaattacaacttcttcccacagatgcccaaatgggag
aataagcaaataacttacaggattttgggatacacctacgatctggactctgagacagtg
gatgatgctttcgctcgggcctttcaggtatgggctgccgtgacgccactgaaattttca
aggatctttgatggagaagcggacatcatgatcaactttggtcgttgggagcatggtgat
ggatatccatttgatgggaaggatgggctacttgcacatgcttttgccccagcaacagga
attggtggtgattctcattttgatgatgatgagttctggacgttgggtgaaggacgagtt
gttaagacaaggtttgggaatgcagaaggggaattttgcaaatttccttttctgtttaat
ggtaaggaataccatagttgcaccacagaaggccgtagcgatggcttcccatggtgttcc
acaacttataattttgatgcagacgcaaaatatggattctgtcctcatgaattgcttttt
acaatgggaggaaatgctggtggagagccatgctcatttcctttcacctttgaaaacagg
cagtacgatagctgcacaacagaaggaagatcggatggctaccggtggtgtagcacaacg
agcaattatgacacagacagaaaatatggattctgtccagaccaagccatgtcaacaatt
ggaggaaactcagatggttcaccttgtgtatttcctttcactttccttcggaaaacatat
gattcctgcacaagcagcgggcgtaatgatggcctattgtggtgttcaaccactggaaac
tatgatgtggacagcaagtggggcttctgccctgacagtggctacagtcttttccttgtt
gctgctcatgaatttggtcatgcgcttggtttggagcattcccaagatcctggagcttta
atggccccaatctacacctacaccaaaaacttcaggctttcaaacgatgacattctcggc
attcaaaaactttatggtgcaccaactgataaacccttgccaccaacacagggtcctgtc
actcctatgaacctttgtgaggagaccttgatttttgatggaattacacatatcagagga
gaaattttcttctttaaagatcgattcttgtggagaaccagaaatccccggtcaaaaccc
ctgggaccaatgctagttgctacttactggactgatctgcctgaaaagattgatgctgcc
tatcaggagcctttaactgacaaagctgtattctttgcaggagatcagcactggctttac
actgccagtgacctggagagtggatatcccaagaaaatctccacactggggctaccagat
gatttgccacatattgatgcagtttttaactggaagaaaaacaagaagacttacatcttt
gcaggtgacaagttttggagatacaatgaagtgaagaaaaagatggatcctggattccct
aagctaattgcagatgcctggaatggcattcctgataatttggatggtgcccttgagtct
cttgagaatggacacacctactttttcaaggattggtactacctccaaatggaagaccag
agcttgaagattattaaagtaggaaatgtgaaaactgactggctcggttgttag
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