Chiloscyllium plagiosum (whitespotted bambooshark): 122558438
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Entry
122558438 CDS
T08871
Symbol
slc6a2
Name
(RefSeq) sodium-dependent noradrenaline transporter isoform X1
KO
K05035
solute carrier family 6 (neurotransmitter transporter, noradrenalin) member 2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122558438 (slc6a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpla02000
]
122558438 (slc6a2)
Transporters [BR:
cpla02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
122558438 (slc6a2)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
122558438
NCBI-ProteinID:
XP_043562949
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Position
17:48742091..48918006
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AA seq
654 aa
AA seq
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MGQYICGVGKIEGVRNRLTLLSRASPRFLPRGMMNKQILPDRKLASVAPMKEYNSVEAKD
TELVLVKEHNGLQYTNTTIISTAPPFTAAEPDRETWGKKIDFLLSVIGFAVDLANVWRFP
FLCYKNGGGAFLIPYLFFLLIAGMPLFYMELALGQYNREGAATVWKICPIFKGVGYAVIL
IALYVGFYYNVIIAWSLYYLFSSFTSDLPWVHCNNHWNSRNCTDPKLLNASVLGNGSKYS
KYKITPAAEYYERGVLHLHESAGIHNLGLPRWQLSLCLLGVVIILYFSLWKGVKTSGKVV
WITATMPYMVLLVLLIHGITLPGALDGIKAYLSIDFERLKEAQVWIDAATQIFYSLGAGF
GVIIAFSSYNKFDNNCYRDAILTSSINCVTSFFSGFAIFSVLGYMAFKHGVDISEVATDG
PGLVFVIYPEAISTLPGSTFWAIMFFIMLLTLGIDSSMGGMEAVVTGITDDFKSLKNHRK
LFTFVTAGGTFLVALFCITNGGIYVLTLLDQFAAGTAILFGVLIEAIGVSWFYGVDRFSE
DIRRMTGFKPGLYWRLCWKFVSPAFLLFVVIVSIVKFKPLTYDGYVFPNWANLVGWGIAV
SSMSLVPIYAIYKLFTVRGTLKERIAYCIIPENEHYLVEQGKVQQFKLKHWLAI
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggggcaatatatttgtggagtcggaaaaattgagggcgttcggaaccgtttaacctta
ctttcaagagcatccccacgttttctcccgcgaggaatgatgaataagcaaatcctgcct
gatcgcaagctggcatctgttgctcccatgaaggagtacaacagcgtggaggcgaaggac
acggagttggtgttggtgaaggagcacaatgggctgcagtacaccaacactaccatcatc
agcaccgcgccccccttcaccgccgctgagcctgacagggagacctggggcaagaagatc
gacttcctactctctgtcatcggctttgccgtggacctggccaacgtgtggaggttccct
tttctctgttacaagaacggaggtggtgcgtttcttatcccctacttgtttttcctgctg
atcgccgggatgcctttattttacatggagctagcattgggccagtacaaccgagagggt
gcagctactgtctggaaaatctgccccatcttcaaaggtgtgggctacgctgtgattctt
atagccctatacgttggcttctactataacgtcattatagcctggtccctgtactatctc
ttctcttcatttacatctgaccttccatgggttcattgcaataatcattggaacagtcgc
aactgtactgacccaaagctactcaatgcctcagtcctgggaaatggaagcaaatattcc
aaatataaaattacaccagctgcggagtattatgagcgtggagttctccatcttcatgaa
agtgctggaattcataatttgggattaccaagatggcaactttccctttgcttgcttggc
gtggtgatcattctctacttcagtctctggaagggggtaaagacatcaggaaaggtggta
tggatcacagcgaccatgccttatatggtgttacttgtactgctaatccatgggatcaca
ttaccaggtgcattggatggaatcaaggcatacctcagcattgactttgagcgcctgaaa
gaagcacaggtctggatcgatgcagcaactcagatcttttattcccttggtgctggattt
ggagttataattgcattttccagttataacaaatttgataacaactgctatcgcgatgct
attcttaccagctccatcaactgtgtgacaagcttcttctcaggatttgcaattttctct
gtgttgggctatatggcattcaagcacggagttgatatttcagaagtggcaacagatggt
ccaggcttagtgtttgttatttatcctgaagcaatctccactctcccagggtcaacattt
tgggcaattatgttcttcataatgctgctgacattgggaattgacagctcaatgggtggt
atggaagctgttgtcactggaattacagatgattttaagtcattgaagaatcaccgaaag
ctcttcacatttgtaacagctggtggaactttcctggttgccctcttctgcatcaccaat
ggtggaatctatgtgctgacgttactcgatcaatttgccgcagggacagcaatcctattt
ggggtattaatagaagccattggtgtatcttggttttatggagttgacagattcagtgaa
gatatcaggcgaatgaccggcttcaaaccaggtctctactggaggctctgctggaagttt
gttagcccagcctttttactgtttgtagtgattgtcagtattgtgaagttcaagccttta
acctatgatggatatgtctttccaaactgggctaaccttgttggatggggtatcgctgtg
tcttcaatgtcgctagtaccaatctacgccatctacaaactctttactgtccgtggcacc
ttaaaggagagaatagcatattgcatcatccctgaaaatgaacattatcttgtggagcaa
ggaaaagtgcagcagtttaagctcaagcactggcttgcaatatga
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